RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 SPRYD4Q8WW59 207 aaPredicted RBP15.64■□□□□ 0.09
NUP50-203ENST00000407019 OTULINQ96BN8 352 aa15.64■□□□□ 0.09
NUP50-203ENST00000407019 HS6ST2Q96MM7 605 aa15.64■□□□□ 0.09
NUP50-203ENST00000407019 SECISBP2Q96T21 854 aaKnown RBP15.64■□□□□ 0.09
NUP50-203ENST00000407019 COQ7Q99807 217 aa15.64■□□□□ 0.09
NUP50-203ENST00000407019 ZNF649Q9BS31 505 aa15.64■□□□□ 0.09
NUP50-203ENST00000407019 SIDT1Q9NXL6 827 aaKnown RBP15.64■□□□□ 0.09
NUP50-203ENST00000407019 TNFRSF10DQ9UBN6 386 aa15.64■□□□□ 0.09
NUP50-203ENST00000407019 KCNE5Q9UJ90 142 aa15.64■□□□□ 0.09
NUP50-203ENST00000407019 HS3ST3A1Q9Y663 406 aa15.64■□□□□ 0.09
NUP50-203ENST00000407019 SMIM30A4D0T7 59 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 FMO6PO60774 539 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 LYPD3O95274 346 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 IFI6P09912 130 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 IFI30P13284 250 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 POU6F2P78424 691 aaPredicted RBP15.63■□□□□ 0.09
NUP50-203ENST00000407019 LRIT3Q3SXY7 679 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 FIGNL1Q6PIW4 674 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 XKRXQ6PP77 449 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 NCCRP1Q6ZVX7 275 aaPredicted RBP15.63■□□□□ 0.09
NUP50-203ENST00000407019 NRARPQ7Z6K4 114 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 SIRT6Q8N6T7 355 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 DIRAS2Q96HU8 199 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 CD180Q99467 661 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 GSDMCQ9BYG8 508 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 FN3KQ9H479 309 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 TIGARQ9NQ88 270 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 FANCMQ8IYD8 2048 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.63■□□□□ 0.09
NUP50-203ENST00000407019 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.63■□□□□ 0.09
NUP50-203ENST00000407019 FABP12A6NFH5 140 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 FAM183AA6NL82 134 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 CASKO14936 926 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 SEMA4FO95754 770 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 HLA-DPB1P04440 258 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 CT62P0C5K7 136 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 GABRG2P18507 467 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 MAKP20794 623 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 GABRA3P34903 492 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 RABIFP47224 123 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 RNF144AP50876 292 aaPredicted RBP15.63■□□□□ 0.09
NUP50-203ENST00000407019 VSX2P58304 361 aaPredicted RBP15.63■□□□□ 0.09
NUP50-203ENST00000407019 MGAT2Q10469 447 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 PLBD1Q6P4A8 553 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 CAMKK1Q8N5S9 505 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 PMM1Q92871 262 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 CCDC3Q9BQI4 270 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 TMED9Q9BVK6 235 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 TCEAL2Q9H3H9 227 aaPredicted RBP15.63■□□□□ 0.09
NUP50-203ENST00000407019 C20orf141Q9NUB4 165 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 GRIP1Q9Y3R0 1128 aa15.63■□□□□ 0.09
NUP50-203ENST00000407019 KIR2DS5A0A0G2JLQ3 304 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 A0A0G2JNG1 304 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 A0A1W2PQ09 198 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 GXYLT2A0PJZ3 443 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 KIR2DS3K7RE56 304 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 BRINP1O60477 761 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 BMP7P18075 431 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 FUT1P19526 365 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 CELP19835 753 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 MAP3K8P41279 467 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 OR2B6P58173 313 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 FXYD6P3P58550 94 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 KIR2DS5Q14953 304 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 AGAP6Q5VW22 663 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 RPL13AP3Q6NVV1 102 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 NIPAL3Q6P499 406 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 ZNF322Q6U7Q0 402 aaPredicted RBP15.62■□□□□ 0.09
NUP50-203ENST00000407019 ABI3BPQ7Z7G0 1075 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 SLC22A18ASQ8N1D0 253 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 ARIH2OSQ8N7S6 290 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 OR51G2Q8NGK0 314 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 SLC37A2Q8TED4 501 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 ABHD8Q96I13 439 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 AGAP4Q96P64 663 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 TBC1D17Q9HA65 648 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 POLE3Q9NRF9 147 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 C14orf105Q9NVL8 296 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 CLDND1Q9NY35 253 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 NPAP1Q9NZP6 1156 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 TMEM5Q9Y2B1 443 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 LRP4O75096 1905 aa15.62■□□□□ 0.09
NUP50-203ENST00000407019 BHLHE40O14503 412 aa15.61■□□□□ 0.09
NUP50-203ENST00000407019 RCBTB2O95199 551 aa15.61■□□□□ 0.09
NUP50-203ENST00000407019 GAAP10253 952 aa15.61■□□□□ 0.09
NUP50-203ENST00000407019 PAICSP22234 425 aaKnown RBP15.61■□□□□ 0.09
NUP50-203ENST00000407019 RAB38P57729 211 aa15.61■□□□□ 0.09
NUP50-203ENST00000407019 SCN1BQ07699 218 aa15.61■□□□□ 0.09
NUP50-203ENST00000407019 PDZK1Q5T2W1 519 aa15.61■□□□□ 0.09
NUP50-203ENST00000407019 MARCH9Q86YJ5 346 aa15.61■□□□□ 0.09
NUP50-203ENST00000407019 SFTPA2Q8IWL1 248 aa15.61■□□□□ 0.09
NUP50-203ENST00000407019 CDK20Q8IZL9 346 aa15.61■□□□□ 0.09
NUP50-203ENST00000407019 GDPD1Q8N9F7 314 aa15.61■□□□□ 0.09
NUP50-203ENST00000407019 KIAA1143Q96AT1 154 aaPredicted RBP15.61■□□□□ 0.09
NUP50-203ENST00000407019 ANKRD9Q96BM1 317 aaPredicted RBP15.61■□□□□ 0.09
NUP50-203ENST00000407019 CTHRC1Q96CG8 243 aa15.61■□□□□ 0.09
NUP50-203ENST00000407019 C8orf33Q9H7E9 229 aaPredicted RBP15.61■□□□□ 0.09
NUP50-203ENST00000407019 ATP13A2Q9NQ11 1180 aa15.61■□□□□ 0.09
NUP50-203ENST00000407019 STARD5Q9NSY2 213 aa15.61■□□□□ 0.09
NUP50-203ENST00000407019 ASB6Q9NWX5 421 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms