RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 PSMA8Q8TAA3 256 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.46□□□□□ -1.06
LIG4-202ENST00000405925 TMEM80Q96HE8 168 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 RNF121Q9H920 327 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 TIGARQ9NQ88 270 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 ABCB10Q9NRK6 738 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 DUSP22Q9NRW4 184 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 ANKRD10Q9NXR5 420 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 A0A1B0GTQ1 180 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 SERINC4A6NH21 518 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 ZNF670-ZNF695F2Z2N8 137 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 PRAMEF4O60810 478 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 ABCB7O75027 752 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 PPP1R3DO95685 299 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 MT-ND2P03891 347 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 HNRNPCP07910 306 aaKnown RBP eCLIP8.46□□□□□ -1.06
LIG4-202ENST00000405925 STAT5AP42229 794 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 CLRN1P58418 232 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 CBFBQ13951 182 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 PRAMEF9Q5VWM5 478 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 RSBN1Q5VWQ0 802 aaPredicted RBP8.46□□□□□ -1.06
LIG4-202ENST00000405925 PMS2CLQ68D20 193 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 ZNF425Q6IV72 752 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 PLBD1Q6P4A8 553 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 C6orf15Q6UXA7 325 aaPredicted RBP8.46□□□□□ -1.06
LIG4-202ENST00000405925 ERI1Q8IV48 349 aaKnown RBP8.46□□□□□ -1.06
LIG4-202ENST00000405925 SLC22A18ASQ8N1D0 253 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 MARVELD2Q8N4S9 558 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 RAB2BQ8WUD1 216 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 DCBLD2Q96PD2 775 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 A4GALTQ9NPC4 353 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 ASB6Q9NWX5 421 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 DAPK2Q9UIK4 370 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 LAMP5Q9UJQ1 280 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 GNG8Q9UK08 70 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 MRPS2Q9Y399 296 aaKnown RBP8.46□□□□□ -1.06
LIG4-202ENST00000405925 VWA8A3KMH1 1905 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 PDCD11Q14690 1871 aaKnown RBP8.46□□□□□ -1.06
LIG4-202ENST00000405925 A0A0A6YYD5 115 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 A0A1W2PPL8 197 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 H0YJX3 145 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 CSO75390 466 aaKnown RBP8.45□□□□□ -1.06
LIG4-202ENST00000405925 INMTO95050 263 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 WISP3O95389 354 aaPredicted RBP8.45□□□□□ -1.06
LIG4-202ENST00000405925 UTS2O95399 124 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 STSP08842 583 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 PRKCAP17252 672 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 EDNRAP25101 427 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 HSD11B1P28845 292 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 POLR2IP36954 125 aaKnown RBP8.45□□□□□ -1.06
LIG4-202ENST00000405925 PERM1Q5SV97 790 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 DDI2Q5TDH0 399 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 EEF1A1P5Q5VTE0 462 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 TSPYL5Q86VY4 417 aaPredicted RBP8.45□□□□□ -1.06
LIG4-202ENST00000405925 NT5CQ8TCD5 201 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 SLC2A12Q8TD20 617 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 COQ7Q99807 217 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 GAL3ST1Q99999 423 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 IRF2BPLQ9H1B7 796 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 ABCB9Q9NP78 766 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 B3GAT2Q9NPZ5 323 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 TRIM36Q9NQ86 728 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 CTSFQ9UBX1 484 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 CNOT11Q9UKZ1 510 aaKnown RBP8.45□□□□□ -1.06
LIG4-202ENST00000405925 OR2T1O43869 369 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 FCMRO60667 390 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 IGHEP01854 428 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 FUCA1P04066 466 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 CELP19835 753 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 PCYT1AP49585 367 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 RAB15P59190 212 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 RPS3AP61247 264 aaKnown RBP8.45□□□□□ -1.06
LIG4-202ENST00000405925 PPP3R1P63098 170 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 PHC1P78364 1004 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 DCTN2Q13561 401 aaKnown RBP8.45□□□□□ -1.06
LIG4-202ENST00000405925 SF3A2Q15428 464 aaKnown RBP8.45□□□□□ -1.06
LIG4-202ENST00000405925 KCTD21Q4G0X4 260 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 SAXO2Q658L1 398 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 GTF2IRD2BQ6EKJ0 949 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 GTF2IRD2Q86UP8 949 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 RPS19BP1Q86WX3 136 aaKnown RBP8.45□□□□□ -1.06
LIG4-202ENST00000405925 HMGCLL1Q8TB92 370 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 OMA1Q96E52 524 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 WDR34Q96EX3 536 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 TM9SF2Q99805 663 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 LMF2Q9BU23 707 aaKnown RBP8.45□□□□□ -1.06
LIG4-202ENST00000405925 ZNF717Q9BY31 904 aaPredicted RBP8.45□□□□□ -1.06
LIG4-202ENST00000405925 SNTG1Q9NSN8 517 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 ERVK-18Q9QC07 812 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 TESQ9UGI8 421 aaKnown RBP8.45□□□□□ -1.06
LIG4-202ENST00000405925 TRBV4-1A0A0J9YWV2 114 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 UPK1AO00322 258 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 SLC1A7O00341 560 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 HMGN4O00479 90 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 TNFSF15O95150 251 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 ZGLP1P0C6A0 271 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 CD1EP15812 388 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 ZNF43P17038 809 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 GDF1P27539 372 aa8.45□□□□□ -1.06
LIG4-202ENST00000405925 AVPR2P30518 371 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms