RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 KCNC4Q03721 635 aa20.17■□□□□ 0.82
EPCAM-202ENST00000405271 KLHL26Q53HC5 615 aa20.17■□□□□ 0.82
EPCAM-202ENST00000405271 MRPL2Q5T653 305 aaKnown RBP20.17■□□□□ 0.82
EPCAM-202ENST00000405271 ABHD17BQ5VST6 288 aa20.17■□□□□ 0.82
EPCAM-202ENST00000405271 B3GNTL1Q67FW5 361 aaPredicted RBP20.17■□□□□ 0.82
EPCAM-202ENST00000405271 RNF138Q8WVD3 245 aa20.17■□□□□ 0.82
EPCAM-202ENST00000405271 WBP1Q96G27 269 aa20.17■□□□□ 0.82
EPCAM-202ENST00000405271 RSPO3Q9BXY4 272 aaPredicted RBP20.17■□□□□ 0.82
EPCAM-202ENST00000405271 DCLRE1BQ9H816 532 aa20.17■□□□□ 0.82
EPCAM-202ENST00000405271 FLRT3Q9NZU0 649 aa20.17■□□□□ 0.82
EPCAM-202ENST00000405271 SLC35A3Q9Y2D2 325 aa20.17■□□□□ 0.82
EPCAM-202ENST00000405271 SH3GLB1Q9Y371 365 aa20.17■□□□□ 0.82
EPCAM-202ENST00000405271 CDHR4A6H8M9 788 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 SERINC4A6NH21 518 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 ALG1L2C9J202 215 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 H3BNH8 94 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 H3BNX3 289 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 OR6B1O95007 311 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 EPPINO95925 133 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 FABP3P05413 133 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 FCGR1AP12314 374 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 GLIPR1L2Q4G1C9 344 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 TMEM81Q6P7N7 255 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 GRAMD2AQ8IUY3 354 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 APLFQ8IW19 511 aaPredicted RBP20.16■□□□□ 0.82
EPCAM-202ENST00000405271 POGLUT1Q8NBL1 392 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 SLC35B4Q969S0 331 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 SECISBP2Q96T21 854 aaKnown RBP20.16■□□□□ 0.82
EPCAM-202ENST00000405271 ARHGDIGQ99819 225 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 TBL1XR1Q9BZK7 514 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 IL1RAPQ9NPH3 570 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 HPF1Q9NWY4 346 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 CHST2Q9Y4C5 530 aa20.16■□□□□ 0.82
EPCAM-202ENST00000405271 BOD1L1Q8NFC6 3051 aa20.15■□□□□ 0.82
EPCAM-202ENST00000405271 HNRNPRO43390 633 aaKnown RBP20.15■□□□□ 0.82
EPCAM-202ENST00000405271 FADS1O60427 444 aa20.15■□□□□ 0.82
EPCAM-202ENST00000405271 IFNW1P05000 195 aa20.15■□□□□ 0.82
EPCAM-202ENST00000405271 ITGB2P05107 769 aa20.15■□□□□ 0.82
EPCAM-202ENST00000405271 CLK3P49761 638 aaKnown RBP20.15■□□□□ 0.82
EPCAM-202ENST00000405271 NRF1Q16656 503 aa20.15■□□□□ 0.82
EPCAM-202ENST00000405271 FNDC7Q5VTL7 733 aa20.15■□□□□ 0.82
EPCAM-202ENST00000405271 CARM1Q86X55 608 aa20.15■□□□□ 0.82
EPCAM-202ENST00000405271 ZDHHC21Q8IVQ6 265 aa20.15■□□□□ 0.82
EPCAM-202ENST00000405271 BEST3Q8N1M1 668 aa20.15■□□□□ 0.82
EPCAM-202ENST00000405271 TNRC6AQ8NDV7 1962 aaKnown RBP20.14■□□□□ 0.82
EPCAM-202ENST00000405271 DNAJB5O75953 348 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 ITGA2P17301 1181 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 CASRP41180 1078 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 RCN1Q15293 331 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 DEFB109BQ30KR1 87 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 DESI1Q6ICB0 168 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 IL20RBQ6UXL0 311 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 PIWIL3Q7Z3Z3 882 aaKnown RBP20.14■□□□□ 0.81
EPCAM-202ENST00000405271 COMTD1Q86VU5 262 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 MISPQ8IVT2 679 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 CLIP4Q8N3C7 705 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 FAM71CQ8NEG0 241 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 OR10G3Q8NGC4 313 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 OR5M3Q8NGP4 307 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 EXTL1Q92935 676 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 C7orf34Q96L11 122 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 SGCZQ96LD1 299 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 NODALQ96S42 347 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 CHID1Q9BWS9 393 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 GPR83Q9NYM4 423 aa20.14■□□□□ 0.81
EPCAM-202ENST00000405271 CLDN24A6NM45 220 aa20.13■□□□□ 0.81
EPCAM-202ENST00000405271 EIF4E1BA6NMX2 242 aaKnown RBP20.13■□□□□ 0.81
EPCAM-202ENST00000405271 CSTAP01040 98 aa20.13■□□□□ 0.81
EPCAM-202ENST00000405271 TNFRSF1BP20333 461 aa20.13■□□□□ 0.81
EPCAM-202ENST00000405271 OR1E2P47887 323 aa20.13■□□□□ 0.81
EPCAM-202ENST00000405271 RGS8P57771 180 aaPredicted RBP20.13■□□□□ 0.81
EPCAM-202ENST00000405271 VLDLRP98155 873 aa20.13■□□□□ 0.81
EPCAM-202ENST00000405271 AGAP7PQ5VUJ5 663 aa20.13■□□□□ 0.81
EPCAM-202ENST00000405271 RTL4Q6ZR62 310 aa20.13■□□□□ 0.81
EPCAM-202ENST00000405271 GRHL3Q8TE85 626 aa20.13■□□□□ 0.81
EPCAM-202ENST00000405271 AGAP4Q96P64 663 aa20.13■□□□□ 0.81
EPCAM-202ENST00000405271 RNPEPL1Q9HAU8 725 aa20.13■□□□□ 0.81
EPCAM-202ENST00000405271 HHATLQ9HCP6 504 aa20.13■□□□□ 0.81
EPCAM-202ENST00000405271 STMN3Q9NZ72 180 aa20.13■□□□□ 0.81
EPCAM-202ENST00000405271 CFAP46Q8IYW2 2715 aa20.13■□□□□ 0.81
EPCAM-202ENST00000405271 PRAMEF25A6NGN4 478 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 H0Y3Z8 333 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 M0R3H8 397 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 NDUFB5O43674 189 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 ATP6V1G2O95670 118 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 PRB1P04280 392 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 UBL4AP11441 157 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 HLCSP50747 726 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 LY6DQ14210 128 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 LINC00303Q3SY05 128 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 ISLR2Q6UXK2 745 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 APOOLQ6UXV4 268 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 ZNF440Q8IYI8 595 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 CYP4Z2PQ8N1L4 340 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 VANGL1Q8TAA9 524 aaPredicted RBP20.12■□□□□ 0.81
EPCAM-202ENST00000405271 PHOSPHO1Q8TCT1 267 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 EXOSC3Q9NQT5 275 aaKnown RBP20.12■□□□□ 0.81
EPCAM-202ENST00000405271 DNAJB12Q9NXW2 375 aaKnown RBP20.12■□□□□ 0.81
EPCAM-202ENST00000405271 KCNMB2Q9Y691 235 aa20.12■□□□□ 0.81
EPCAM-202ENST00000405271 CHCHD2Q9Y6H1 151 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms