RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 DPH1Q9BZG8 443 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 TMEFF2Q9UIK5 374 aaPredicted RBP19.37■□□□□ 0.69
TPM1-208ENST00000404484 KCNE5Q9UJ90 142 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 PADI1Q9ULC6 663 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 ZFYVE26Q68DK2 2539 aa19.37■□□□□ 0.69
TPM1-208ENST00000404484 NPIPA5A0A0B4J1W7 369 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 NPIPA7E9PJI5 369 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 KLK10O43240 276 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 FMO6PO60774 539 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 NPIPA8P0DM63 369 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 DAPP51397 102 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 TLE3Q04726 772 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 CLN3Q13286 438 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 LAPTM4AQ15012 233 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 NPTX1Q15818 432 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 HSDL2Q6YN16 418 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 GRAMD2AQ8IUY3 354 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 ZSCAN1Q8NBB4 408 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 NFAM1Q8NET5 270 aaPredicted RBP19.36■□□□□ 0.69
TPM1-208ENST00000404484 TP53INP1Q96A56 240 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 WFDC6Q9BQY6 131 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 TOR3AQ9H497 397 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 ANKRD19PQ9H560 264 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 AKIRIN1Q9H9L7 192 aaPredicted RBP19.36■□□□□ 0.69
TPM1-208ENST00000404484 ZNF556Q9HAH1 456 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 KRT84Q9NSB2 600 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 RLIMQ9NVW2 624 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 RHCGQ9UBD6 479 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 ENOPH1Q9UHY7 261 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 PTRH2Q9Y3E5 179 aaKnown RBP19.36■□□□□ 0.69
TPM1-208ENST00000404484 LOC400499M0QZD8 3231 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 SDK2Q58EX2 2172 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 LOC102723996A0A087X1L8 192 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 IGHV3-20A0A0C4DH32 117 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 CENPVL1A0A0U1RR11 272 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 SEMA7AO75326 666 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 OR5F1O95221 314 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 DLGAP3O95886 979 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 FOXL2P58012 376 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 ADARB1P78563 741 aaKnown RBP19.36■□□□□ 0.69
TPM1-208ENST00000404484 ST3GAL3Q11203 375 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 PDZK1Q5T2W1 519 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 KRT80Q6KB66 452 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 FAM199XQ6PEV8 388 aaPredicted RBP19.36■□□□□ 0.69
TPM1-208ENST00000404484 PLEKHM3Q6ZWE6 761 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 ZNF614Q8N883 585 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 TOR1AIP2Q8NFQ8 470 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 OR2Y1Q8NGV0 311 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 OR8K3Q8NH51 312 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 CRELD1Q96HD1 420 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 MCHR1Q99705 422 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 UBQLN4Q9NRR5 601 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 TESQ9UGI8 421 aaKnown RBP19.36■□□□□ 0.69
TPM1-208ENST00000404484 SSUH2Q9Y2M2 353 aa19.36■□□□□ 0.69
TPM1-208ENST00000404484 CHD6Q8TD26 2715 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 MGAQ8IWI9 3026 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 RAB40ALP0C0E4 278 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 ITGAMP11215 1152 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 MYF6P23409 242 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 ELAVL4P26378 380 aaKnown RBP19.35■□□□□ 0.69
TPM1-208ENST00000404484 CD82P27701 267 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 IL12BP29460 328 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 FOLR3P41439 243 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 RNF4P78317 190 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 PIN1Q13526 163 aaPredicted RBP19.35■□□□□ 0.69
TPM1-208ENST00000404484 FGFBP1Q14512 234 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 COL28A1Q2UY09 1125 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 DTX1Q86Y01 620 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 SLC34A3Q8N130 599 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 ZNF441Q8N8Z8 693 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 NUBPLQ8TB37 319 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 DIO2Q92813 273 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 FEVQ99581 238 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 WDR77Q9BQA1 342 aaPredicted RBP19.35■□□□□ 0.69
TPM1-208ENST00000404484 SPRY4Q9C004 299 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 POFUT2Q9Y2G5 429 aa19.35■□□□□ 0.69
TPM1-208ENST00000404484 MAGEA13PA6NCF6 341 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 CLDN24A6NM45 220 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 FRS3O43559 492 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 HPGDP15428 266 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 RPS6KA3P51812 740 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 NR0B1P51843 470 aaKnown RBP19.34■□□□□ 0.69
TPM1-208ENST00000404484 NRG3P56975 720 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 SLC26A5P58743 744 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 TRAM2Q15035 370 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 ZIK1Q3SY52 487 aaPredicted RBP19.34■□□□□ 0.69
TPM1-208ENST00000404484 SWT1Q5T5J6 900 aaKnown RBP19.34■□□□□ 0.69
TPM1-208ENST00000404484 SLC5A8Q8N695 610 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 APCDD1LQ8NCL9 501 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 OR5L2Q8NGL0 311 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 MBOAT4Q96T53 435 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 SLC35A3Q9Y2D2 325 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 ITPR1Q14643 2758 aa19.34■□□□□ 0.69
TPM1-208ENST00000404484 NBEAQ8NFP9 2946 aa19.33■□□□□ 0.69
TPM1-208ENST00000404484 TRBV4-1A0A0J9YWV2 114 aa19.33■□□□□ 0.69
TPM1-208ENST00000404484 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.33■□□□□ 0.69
TPM1-208ENST00000404484 KLF7O75840 302 aaPredicted RBP19.33■□□□□ 0.69
TPM1-208ENST00000404484 SEC24DO94855 1032 aaPredicted RBP19.33■□□□□ 0.69
TPM1-208ENST00000404484 LIPCP11150 499 aa19.33■□□□□ 0.69
TPM1-208ENST00000404484 CHN2P52757 468 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms