RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 THEGQ9P2T0 379 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 OR12D3Q9UGF7 316 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 BAIAP2L1Q9UHR4 511 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 LNPEPQ9UIQ6 1025 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 LSM7Q9UK45 103 aaKnown RBP4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 ATG2BQ96BY7 2078 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 TICRRQ7Z2Z1 1910 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 SZT2Q5T011 3432 aa4.15□□□□□ -1.74
HMGB3P19-201ENST00000403971 NCOR1O75376 2440 aa4.15□□□□□ -1.74
HMGB3P19-201ENST00000403971 SYNJ2BP-COX16A0A087WUM0 186 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 hCG_38984A0A1B0GV85 526 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 C13orf42A0A1B0GVH6 325 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 A0A1W2PRV1 198 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 MAGEB16A2A368 324 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 CTAGE15A4D2H0 777 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 MPTX1A8MV57 137 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 E9PAM4 449 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 LMO7DNF2Z398 122 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 SLC9A3R1O14745 358 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 SIGLEC5O15389 551 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 CST8O60676 142 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 RPLP0P05388 317 aaKnown RBP4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 SBK2P0C263 348 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF883P0CG24 379 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 MBL2P11226 248 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 C4BPBP20851 252 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 OAS2P29728 719 aaKnown RBP4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 CHRNA3P32297 505 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 SLC1A3P43003 542 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 FNTAP49354 379 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 YBEYP58557 167 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 TPI1P60174 286 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF33AQ06730 810 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 XRCC4Q13426 336 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 DPYSQ14117 519 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 PAFAH1B3Q15102 231 aaKnown RBP4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 SIX1Q15475 284 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 FASTKD1Q53R41 847 aaKnown RBP4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF789Q5FWF6 425 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 MS4A13Q5J8X5 152 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 AGAP6Q5VW22 663 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 GSG1LQ6UXU4 331 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 CTAGE6Q86UF2 777 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 LRRC49Q8IUZ0 686 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF683Q8IZ20 524 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 MMGT1Q8N4V1 131 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF557Q8N988 423 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 SMPDL3AQ92484 453 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 FAM46BQ96A09 425 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 OTUB2Q96DC9 234 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 TBC1D31Q96DN5 1066 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 TCEAL4Q96EI5 215 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 ATXN7L3BQ96GX2 97 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 LINC00479Q96M42 142 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF599Q96NL3 588 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 CSPG4P5Q96PW8 444 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 CYP2S1Q96SQ9 504 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 PSMB7Q99436 277 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZYG11BQ9C0D3 744 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 GFRA4Q9GZZ7 299 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 MTHFD2LQ9H903 347 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 RNPEPL1Q9HAU8 725 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZDHHC18Q9NUE0 388 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 GPATCH2LQ9NWQ4 482 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 COX16Q9P0S2 106 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 ITM2BQ9Y287 266 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 CPQQ9Y646 472 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 C5orf42Q9H799 3197 aa4.15□□□□□ -1.75
HMGB3P19-201ENST00000403971 CXorf51AA0A1B0GTR3 108 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 SRRM4A7MD48 611 aaKnown RBP4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 HACD1B0YJ81 288 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 F5H5T6 163 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 M0R296 226 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 MCF2LO15068 1137 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 CLDN11O75508 207 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 VCLP18206 1134 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 STIP1P31948 543 aaKnown RBP4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 FEN1P39748 380 aaKnown RBP4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 HNF4AP41235 474 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 SERPINH1P50454 418 aaKnown RBP4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 LUMP51884 338 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 NDST2P52849 883 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 CDH4P55283 916 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 NTHL1P78549 312 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 CNTN1Q12860 1018 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 CALCOCO2Q13137 446 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 CEACAM7Q14002 265 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF77Q15935 545 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 ACKR1Q16570 336 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 MOGAT2Q3SYC2 334 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 MPPE1Q53F39 396 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 RABGAP1LQ5R372 815 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 NCBP2-AS2Q69YL0 99 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 TCEAL6Q6IPX3 200 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 FBXL22Q6P050 247 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 Q6ZVQ6 151 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 Q71RC1 249 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 NLRP14Q86W24 1093 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 UMODL1-AS1Q8N2C9 162 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms