RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ZNF483Q8TF39 744 aaPredicted RBP10.5□□□□□ -0.73
SPTLC1P3-201ENST00000403408 MRRFQ96E11 262 aaKnown RBP10.5□□□□□ -0.73
SPTLC1P3-201ENST00000403408 LMF2Q9BU23 707 aaKnown RBP10.5□□□□□ -0.73
SPTLC1P3-201ENST00000403408 EBPLQ9BY08 206 aa10.5□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ACPTQ9BZG2 426 aa10.5□□□□□ -0.73
SPTLC1P3-201ENST00000403408 GLIPR2Q9H4G4 154 aa10.5□□□□□ -0.73
SPTLC1P3-201ENST00000403408 CXorf36Q9H7Y0 433 aa10.5□□□□□ -0.73
SPTLC1P3-201ENST00000403408 KLHL13Q9P2N7 655 aa10.5□□□□□ -0.73
SPTLC1P3-201ENST00000403408 VPS29Q9UBQ0 182 aa10.5□□□□□ -0.73
SPTLC1P3-201ENST00000403408 NOTCH1P46531 2555 aa10.5□□□□□ -0.73
SPTLC1P3-201ENST00000403408 A0A087WV62 115 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 IGHV4-61A0A0C4DH41 118 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ALG1L2C9J202 215 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 C9JVG2 144 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 STX16-NPEPL1H3BU86 382 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 MANBAO00462 879 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 STX16O14662 325 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 EIF3HO15372 352 aaKnown RBP eCLIP10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 PCDH7O60245 1069 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 OR4F21O95013 312 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 OXSR1O95747 527 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 PGRP06401 933 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 LINGO3P0C6S8 592 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 EGR1P18146 543 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 USF1P22415 310 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 IGHV1-2P23083 117 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 GABRA3P34903 492 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 SFTPDP35247 375 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 MANFP55145 182 aaKnown RBP10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 CARD18P57730 90 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 DSCR9P59020 149 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 LSM11P83369 360 aaKnown RBP eCLIP10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 SLC18A2Q05940 514 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 PPA1Q15181 289 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 CD226Q15762 336 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 STK11Q15831 433 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 AGAP6Q5VW22 663 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 CCDC25Q86WR0 208 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 OR2L13Q8N349 312 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 FAM168AQ92567 244 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ZNF75CPQ92670 426 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 HOXB13Q92826 284 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ZNF775Q96BV0 537 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 SH3YL1Q96HL8 342 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ADAD1Q96M93 576 aaKnown RBP10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 KLHL15Q96M94 604 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 TBL1XR1Q9BZK7 514 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ADAM19Q9H013 955 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 FANCFQ9NPI8 374 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 CBLN4Q9NTU7 201 aa10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 PAQR5Q9NXK6 330 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 NUP214P35658 2090 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1P3-201ENST00000403408 A0A087WZY1 265 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 LOC100289279A0A1B0GTE1 492 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 CCDC189A1A4V9 331 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 PGM3O95394 542 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 GSTA2P09210 222 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ITGA2P17301 1181 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 COX5AP20674 150 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 PRIM2P49643 509 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 RNF144AP50876 292 aaPredicted RBP10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 NCBP2P52298 156 aaKnown RBP eCLIP10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 FOXF1Q12946 379 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ZDHHC24Q6UX98 284 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 Q6ZT83 130 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 MEX3DQ86XN8 651 aaKnown RBP10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 TDRPQ86YL5 185 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 LILRA2Q8N149 483 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 PROX1Q92786 737 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ELP4Q96EB1 424 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ZNF300Q96RE9 604 aaPredicted RBP10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 DHRS9Q9BPW9 319 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 NGBQ9NPG2 151 aa10.48□□□□□ -0.73
SPTLC1P3-201ENST00000403408 A0A1W2PR80 420 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 H7C417 338 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 COQ9O75208 318 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 YES1P07947 543 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 TCP1P17987 556 aaKnown RBP10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 NTF4P34130 210 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 HSD17B3P37058 310 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 MAGEA4P43358 317 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 MAGEA12P43365 314 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 OR3A2P47893 321 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 FOXG1P55316 489 aaPredicted RBP10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 RAB35Q15286 201 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 TOMM34Q15785 309 aaPredicted RBP10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 MST1LQ2TV78 715 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 FAM174BQ3ZCQ3 159 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 TMEM201Q5SNT2 666 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 FAM166AQ6J272 317 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 FCRLAQ7L513 359 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 TRABD2AQ86V40 505 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 MUC15Q8N387 334 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ZNF433Q8N7K0 673 aaPredicted RBP10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 CDYL2Q8N8U2 506 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 FAM110BQ8TC76 370 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 ZBTB8AQ96BR9 441 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 AMDHD1Q96NU7 426 aa10.47□□□□□ -0.73
SPTLC1P3-201ENST00000403408 BBS4Q96RK4 519 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms