RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 MCTS1Q9ULC4 181 aaKnown RBP12.95□□□□□ -0.34
VAPA-202ENST00000400000 PRAMEF26H0Y7S4 382 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 FDXRP22570 491 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 CSNK1A1P48729 337 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 CDK3Q00526 305 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 ZNF783Q6ZMS7 281 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 SYNPRQ8TBG9 265 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 HS6ST2Q96MM7 605 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 CASD1Q96PB1 797 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 ZNF142P52746 1687 aaPredicted RBP12.95□□□□□ -0.34
VAPA-202ENST00000400000 DRD2P14416 443 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 DCST2Q5T1A1 773 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 GTF2H4Q92759 462 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 ZNF317Q96PQ6 595 aaPredicted RBP12.95□□□□□ -0.34
VAPA-202ENST00000400000 KLHL13Q9P2N7 655 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 TNFSF4P23510 183 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 CXCR4P61073 352 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 PAN3Q58A45 887 aaKnown RBP12.95□□□□□ -0.34
VAPA-202ENST00000400000 TMEM53Q6P2H8 277 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 VWA5B2Q8N398 1253 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 OR4K5Q8NGD3 323 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 ZUFSPQ96AP4 578 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 RPS18P62269 152 aaKnown RBP12.95□□□□□ -0.34
VAPA-202ENST00000400000 GRAMD2AQ8IUY3 354 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 PACRGLQ8N7B6 248 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 TPPP3Q9BW30 176 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 ZNF576Q9H609 170 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 POPDC3Q9HBV1 291 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 DNAJC15Q9Y5T4 150 aa12.95□□□□□ -0.34
VAPA-202ENST00000400000 CER1O95813 267 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 TUBA3CQ13748 450 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 RGNQ15493 299 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 IL26Q9NPH9 171 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 TUBA8Q9NY65 449 aaPredicted RBP12.94□□□□□ -0.34
VAPA-202ENST00000400000 TMEM184BQ9Y519 407 aaPredicted RBP12.94□□□□□ -0.34
VAPA-202ENST00000400000 TIMM8AO60220 97 aaPredicted RBP12.94□□□□□ -0.34
VAPA-202ENST00000400000 HLA-DMAP28067 261 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 PAGE3Q5JUK9 113 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 HEPHL1Q6MZM0 1159 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 MAMDC4Q6UXC1 1216 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 B3GLCTQ6Y288 498 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 PARS2Q7L3T8 475 aaKnown RBP12.94□□□□□ -0.34
VAPA-202ENST00000400000 ACVR1CQ8NER5 493 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 C17orf50Q8WW18 174 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 SHISA4Q96DD7 197 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 BOLA2-SMG1P6H3BVE0 249 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 BET1O15155 118 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 CTSCP53634 463 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 ACY1Q03154 408 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 DMWDQ09019 674 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 PLEKHN1Q494U1 663 aaPredicted RBP12.94□□□□□ -0.34
VAPA-202ENST00000400000 ZNF585AQ6P3V2 769 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 GPN2Q9H9Y4 310 aaPredicted RBP12.94□□□□□ -0.34
VAPA-202ENST00000400000 CPNE7Q9UBL6 633 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 B3GNT3Q9Y2A9 372 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 NEURL4Q96JN8 1562 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 A0A1W2PQL4 384 aaPredicted RBP12.94□□□□□ -0.34
VAPA-202ENST00000400000 TRAPPC13A5PLN9 417 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 ADAM12O43184 909 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 BCAS1O75363 584 aaPredicted RBP12.94□□□□□ -0.34
VAPA-202ENST00000400000 ALDH3B1P43353 468 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 GPR50Q13585 617 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 TCTE1Q5JU00 501 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 KCTD20Q7Z5Y7 419 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 LGALS12Q96DT0 336 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 SLC46A2Q9BY10 475 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 OLAHQ9NV23 265 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 TBCCD1Q9NVR7 557 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 RIMS3Q9UJD0 308 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 TMEM14AQ9Y6G1 99 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 PABPC4LP0CB38 370 aaKnown RBP12.94□□□□□ -0.34
VAPA-202ENST00000400000 ZNF836Q6ZNA1 936 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 BORCS7Q96B45 105 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 DMRT3Q9NQL9 472 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 IGSF5Q9NSI5 407 aa12.94□□□□□ -0.34
VAPA-202ENST00000400000 SLC16A7O60669 478 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 AHRP35869 848 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 EXOSC6Q5RKV6 272 aaKnown RBP12.93□□□□□ -0.34
VAPA-202ENST00000400000 TANGO2Q6ICL3 276 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 UMODL1-AS1Q8N2C9 162 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 ACOT4Q8N9L9 421 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 OR5D18Q8NGL1 313 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 C4orf36Q96KX1 117 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 ZIC5Q96T25 663 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 TAAR2Q9P1P5 351 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 CCL26Q9Y258 94 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 CEBPZOSA8MTT3 80 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 BCAT2O15382 392 aaPredicted RBP12.93□□□□□ -0.34
VAPA-202ENST00000400000 CREBL2O60519 120 aaPredicted RBP12.93□□□□□ -0.34
VAPA-202ENST00000400000 TSPAN15O95858 294 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 MT-ND4P03905 459 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 RAB3AP20336 220 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 GABRA5P31644 462 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 FADDQ13158 208 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 CAMK2DQ13557 499 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 NADSYN1Q6IA69 706 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 KDELC1Q6UW63 502 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 ESX1Q8N693 406 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 TUBG2Q9NRH3 451 aa12.93□□□□□ -0.34
VAPA-202ENST00000400000 DUSP13Q9UII6 198 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms