RNA–Protein interactions for RNA: ENST00000398367.1

UBASH3A-203, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best) BASIC

Gene UBASH3A, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-203ENST00000398367 PRG2P13727 222 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 HPGDP15428 266 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 ZNF28P17035 718 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 CHMP24386 653 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 CRHBPP24387 322 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 HTR2AP28223 471 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 IL12BP29460 328 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 CDC42P60953 191 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 INSM1Q01101 510 aaPredicted RBP13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 TEKQ02763 1124 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 PLAURQ03405 335 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 MAD2L1BPQ15013 274 aaPredicted RBP13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 KLHL26Q53HC5 615 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 LCN10Q6JVE6 187 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 HSDL2Q6YN16 418 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 CPEB2Q7Z5Q1 589 aaKnown RBP13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 ZER1Q7Z7L7 766 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 SLC34A3Q8N130 599 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 NFAM1Q8NET5 270 aaPredicted RBP13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 OR4C3Q8NH37 302 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 GNPDA2Q8TDQ7 276 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 CNOT9Q92600 299 aaKnown RBP13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 MR1Q95460 341 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 TP53INP1Q96A56 240 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 EFHD2Q96C19 240 aaPredicted RBP13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 VMP1Q96GC9 406 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 LIN37Q96GY3 246 aaPredicted RBP13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 PRRX2Q99811 253 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 FAM192AQ9GZU8 254 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 REV1Q9UBZ9 1251 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 SLC7A7Q9UM01 511 aa13.49□□□□□ -0.25
UBASH3A-203ENST00000398367 ZAR1LA6NP61 321 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 GDF9O60383 454 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 ANGPTL1O95841 491 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 CSTAP01040 98 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 THY1P04216 161 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 TFAP2AP05549 437 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 TBXA2RP21731 343 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 MMP11P24347 488 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 CSNK2BP67870 215 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 PLCXD2Q0VAA5 305 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 PTGES3Q15185 160 aaKnown RBP13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 CDCP2Q5VXM1 449 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 PAPD4Q6PIY7 484 aaKnown RBP13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 FAM198BQ6UWH4 519 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 ZNF517Q6ZMY9 492 aaPredicted RBP13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 RNF113BQ8IZP6 322 aaKnown RBP13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 LSMEM1Q8N8F7 131 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 OR8K3Q8NH51 312 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 NUBPLQ8TB37 319 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 FAM81AQ8TBF8 368 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 POLR1BQ9H9Y6 1135 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 NDUFA13Q9P0J0 144 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 NTNG1Q9Y2I2 539 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 NCOR1O75376 2440 aa13.48□□□□□ -0.25
UBASH3A-203ENST00000398367 A0A0B4J2E0 115 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 IGHV3-20A0A0C4DH32 117 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 A0A1B0GX12 115 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 C4orf47A7E2U8 309 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 MPZL2O60487 215 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 ABCB7O75027 752 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 BCAS1O75363 584 aaPredicted RBP13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 UTS2O95399 124 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 NGFRP08138 427 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 ENDOUP21128 410 aaKnown RBP13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 FPR3P25089 353 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 NR0B1P51843 470 aaKnown RBP13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 NRG3P56975 720 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 RNF4P78317 190 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 TSPAN31Q12999 210 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 ISXQ2M1V0 245 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 RAB11FIP2Q7L804 512 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 SLCO6A1Q86UG4 719 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 CCDC71Q8IV32 467 aaPredicted RBP13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 NKAIN4Q8IVV8 208 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 ENTHD1Q8IYW4 607 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 APCDD1LQ8NCL9 501 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 CNIH3Q8TBE1 160 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 LMF1Q96S06 567 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 DDA1Q9BW61 102 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 EXOSC3Q9NQT5 275 aaKnown RBP13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 IMPAD1Q9NX62 359 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 H3BN98 237 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 SLC1A7O00341 560 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 CHP2O43745 196 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 REM1O75628 298 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 CDK4P11802 303 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 EEF1B2P24534 225 aaKnown RBP13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 ACAA2P42765 397 aaKnown RBP13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 OMPP47874 163 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 GSSP48637 474 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 IDH2P48735 452 aaKnown RBP13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 RNF144AP50876 292 aaPredicted RBP13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 PNLIPRP2P54317 469 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 FOXL2P58012 376 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 EIF3IQ13347 325 aaKnown RBP13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 NCF4Q15080 339 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 CCDC157Q569K6 752 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 LAIR2Q6ISS4 152 aa13.47□□□□□ -0.25
UBASH3A-203ENST00000398367 ZNF773Q6PK81 442 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms