RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 UGT2B17O75795 530 aa19.24■□□□□ 0.67
TSPAN4-206ENST00000397408 GCKP35557 465 aa19.24■□□□□ 0.67
TSPAN4-206ENST00000397408 CHRNEQ04844 493 aa19.24■□□□□ 0.67
TSPAN4-206ENST00000397408 CRYZQ08257 329 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-206ENST00000397408 FADDQ13158 208 aa19.24■□□□□ 0.67
TSPAN4-206ENST00000397408 ZNF630Q2M218 657 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-206ENST00000397408 EMC4Q5J8M3 183 aa19.24■□□□□ 0.67
TSPAN4-206ENST00000397408 WLSQ5T9L3 541 aa19.24■□□□□ 0.67
TSPAN4-206ENST00000397408 DLEU7Q6UYE1 221 aa19.24■□□□□ 0.67
TSPAN4-206ENST00000397408 MTERF4Q7Z6M4 381 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-206ENST00000397408 SFXN2Q96NB2 322 aa19.24■□□□□ 0.67
TSPAN4-206ENST00000397408 SAP130Q9H0E3 1048 aa19.24■□□□□ 0.67
TSPAN4-206ENST00000397408 PCNX3Q9H6A9 2034 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 OIP5O43482 229 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 ZIC3O60481 467 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 SNX3O60493 162 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 BCHEP06276 602 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 BMP7P18075 431 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 HK1P19367 917 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 PPIBP23284 216 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 ADSLP30566 484 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 ZNF117Q03924 483 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 NFYCQ13952 458 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 MAPRE2Q15555 327 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 MAPK14Q16539 360 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 NDUFAF6Q330K2 333 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 GXYLT1Q4G148 440 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 LRRC74BQ6ZQY2 392 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 HMGN2P46Q86SG4 172 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 SNX32Q86XE0 403 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 B4GALNT2Q8NHY0 566 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 ABTB1Q969K4 478 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 CPPED1Q9BRF8 314 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 UGT2B28Q9BY64 529 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 QRSL1Q9H0R6 528 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 SLC38A1Q9H2H9 487 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 TP63Q9H3D4 680 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 RUBCNLQ9H714 662 aa19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 THUMPD1Q9NXG2 353 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 MRPS18CQ9Y3D5 142 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-206ENST00000397408 SERINC4A6NH21 518 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 GTPBP1O00178 669 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 FBP2O00757 339 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 CCDC22O60826 627 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 NUDT7P0C024 238 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 RNF224P0DH78 156 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 ESRRAP11474 423 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 MSX1P28360 303 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 PER3P56645 1201 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 MAPK11Q15759 364 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 NHSL2Q5HYW2 709 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 DCST1Q5T197 706 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 RAET1LQ5VY80 246 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 VASNQ6EMK4 673 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 ZNF585AQ6P3V2 769 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 ARSKQ6UWY0 536 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 CGREF1Q99674 301 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 TIMP4Q99727 224 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 IKZF5Q9H5V7 419 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 SUCOQ9UBS9 1254 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 CARD8Q9Y2G2 431 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 MEMO1Q9Y316 297 aa19.22■□□□□ 0.67
TSPAN4-206ENST00000397408 DOPEY2Q9Y3R5 2298 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 TMEM247A6NEH6 219 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 FIGNL2A6NMB9 653 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 SLC22A2O15244 555 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 ACTL6AO96019 429 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 LDLRP01130 860 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 TFPTP0C1Z6 253 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 UBL4AP11441 157 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 BMP2P12643 396 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 CRISP3P54108 245 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 GFRA1P56159 465 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 CBLN3Q6UW01 205 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 NCCRP1Q6ZVX7 275 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 EID3Q8N140 333 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 C10orf111Q8N326 155 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 TMCO5AQ8N6Q1 288 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 SSC4DQ8WTU2 575 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 SLC38A5Q8WUX1 472 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 OIT3Q8WWZ8 545 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 ZG16BQ96DA0 208 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 CCDC120Q96HB5 630 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 TMEM19Q96HH6 336 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 KLHDC3Q9BQ90 382 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 ALKBH4Q9NXW9 302 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 FAM53CQ9NYF3 392 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 CORO2BQ9UQ03 480 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 VDAC3Q9Y277 283 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 L3MBTL1Q9Y468 752 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 GMEB1Q9Y692 573 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 DOPEY1Q5JWR5 2465 aa19.21■□□□□ 0.67
TSPAN4-206ENST00000397408 PCNX1Q96RV3 2341 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 LOC100653049A0A140TA62 436 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 BBIP1A8MTZ0 92 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 EVPLLA8MZ36 301 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 KRT34O76011 436 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 ZNF41P51814 821 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 B3GALT5-AS1P59052 145 aa19.2■□□□□ 0.66
TSPAN4-206ENST00000397408 MMEL1Q495T6 779 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms