RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CACYBPQ9HB71 228 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-205ENST00000397406 RIMS3Q9UJD0 308 aa15.55■□□□□ 0.08
TSPAN4-205ENST00000397406 SH3GLB1Q9Y371 365 aa15.55■□□□□ 0.08
TSPAN4-205ENST00000397406 TLN1Q9Y490 2541 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-205ENST00000397406 SPENQ96T58 3664 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-205ENST00000397406 CDHR4A6H8M9 788 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 hCG_2039718K7EN88 272 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 ABCB7O75027 752 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 ITGA10O75578 1167 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 FABP3P05413 133 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 NGFRP08138 427 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 FBXO45P0C2W1 286 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 FCGR1AP12314 374 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 KCNC4Q03721 635 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 AIMP2Q13155 320 aaKnown RBP15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 FGFBP1Q14512 234 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 EIPR1Q53HC9 387 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 MRPL2Q5T653 305 aaKnown RBP15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 FCRLBQ6BAA4 426 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 JMJD6Q6NYC1 403 aaPredicted RBP15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 RPS19BP1Q86WX3 136 aaKnown RBP15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 CARM1Q86X55 608 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 LACC1Q8IV20 430 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 SLC5A8Q8N695 610 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 TMEM102Q8N9M5 508 aaPredicted RBP15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 BRIX1Q8TDN6 353 aaKnown RBP15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 THAP4Q8WY91 577 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 HGDQ93099 445 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 AMBRA1Q9C0C7 1298 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 CDCP1Q9H5V8 836 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 ZBTB20Q9HC78 741 aaPredicted RBP15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 AGPAT4Q9NRZ5 378 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 RLIMQ9NVW2 624 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 ABCG2Q9UNQ0 655 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 YARS2Q9Y2Z4 477 aaKnown RBP15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 DTNAQ9Y4J8 743 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 EML6Q6ZMW3 1958 aa15.54■□□□□ 0.08
TSPAN4-205ENST00000397406 K7EM74 188 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 M0R3H8 397 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 BCAS1O75363 584 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 FASP25445 335 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 RNF144AP50876 292 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 FBXW4P57775 412 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 SLC34A1Q06495 639 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 EFR3AQ14156 821 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 DEFB109BQ30KR1 87 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 FNDC7Q5VTL7 733 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 APOOLQ6UXV4 268 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 RBM45Q8IUH3 476 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 GRAMD2AQ8IUY3 354 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 ZNF614Q8N883 585 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 ZNF527Q8NB42 609 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 RNF138Q8WVD3 245 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 THOC3Q96J01 351 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 SLC25A18Q9H1K4 315 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 ATP13A2Q9NQ11 1180 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 RYDENQ9NUL5 291 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 NDUFAF4Q9P032 175 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 C6orf203Q9P0P8 240 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 HEATR5AQ86XA9 2040 aa15.53■□□□□ 0.08
TSPAN4-205ENST00000397406 SERINC4A6NH21 518 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 HS6ST1O60243 411 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 FADS1O60427 444 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 IFNW1P05000 195 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 ADH7P40394 386 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 SOX3P41225 446 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 TMED10P49755 219 aaKnown RBP15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 KCNAB2Q13303 367 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 NPTX1Q15818 432 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 ATP6AP1Q15904 470 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 NTRK2Q16620 822 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 ZNF791Q3KP31 576 aaPredicted RBP15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 NUP54Q7Z3B4 507 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 AMIGO2Q86SJ2 522 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 CMIPQ8IY22 773 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 SIRT6Q8N6T7 355 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 POGLUT1Q8NBL1 392 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 OR6T1Q8NGN1 323 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 VANGL1Q8TAA9 524 aaPredicted RBP15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 SPACA9Q96E40 222 aaPredicted RBP15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 ZNF300Q96RE9 604 aaPredicted RBP15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 RASSF4Q9H2L5 321 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 KLHL28Q9NXS3 571 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 SLC9A8Q9Y2E8 581 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 ENPP4Q9Y6X5 453 aa15.52■□□□□ 0.08
TSPAN4-205ENST00000397406 A0A1W2PQD3 144 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 SCDO00767 359 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 ADAM10O14672 748 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 CLOCKO15516 846 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 FRS3O43559 492 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 SEMA7AO75326 666 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 OR6B1O95007 311 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 DIRAS1O95057 198 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 PRSS23O95084 383 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 LDLRP01130 860 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 EVI2BP34910 448 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 SSR4P51571 173 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 ZSWIM7Q19AV6 140 aa15.51■□□□□ 0.07
TSPAN4-205ENST00000397406 B3GNTL1Q67FW5 361 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms