RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 UTS2O95399 124 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 EPPINO95925 133 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 ME2P23368 584 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 IL12AP29459 219 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 ZFP36L2P47974 494 aaKnown RBP13.23□□□□□ -0.29
SEC13-208ENST00000397109 RFX3P48380 749 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 CCT3P49368 545 aaKnown RBP13.23□□□□□ -0.29
SEC13-208ENST00000397109 DSCR4P56555 118 aaPredicted RBP13.23□□□□□ -0.29
SEC13-208ENST00000397109 RCAN2Q14206 197 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 PGS1Q32NB8 556 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 SPDYE7PQ495Y7 208 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 C8orf82Q6P1X6 216 aaPredicted RBP13.23□□□□□ -0.29
SEC13-208ENST00000397109 BHLHB9Q6PI77 547 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 IFNEQ86WN2 208 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 CCDC71Q8IV32 467 aaPredicted RBP13.23□□□□□ -0.29
SEC13-208ENST00000397109 SLC16A11Q8NCK7 471 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 SFXN5Q8TD22 340 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 WDR60Q8WVS4 1066 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 PIK3R3Q92569 461 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 CDRT15Q96T59 188 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 STACQ99469 402 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 TBL1XR1Q9BZK7 514 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 KCNJ16Q9NPI9 418 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 DUSP22Q9NRW4 184 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 DKKL1Q9UK85 242 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 FBXL2Q9UKC9 423 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 CAMK2AQ9UQM7 478 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 POMPQ9Y244 141 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 CELSR2Q9HCU4 2923 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 ITPR2Q14571 2701 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 FAM234BA2RU67 622 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 ANGPT2O15123 496 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 C6orf47O95873 294 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 HMGN2P05204 90 aaKnown RBP13.23□□□□□ -0.29
SEC13-208ENST00000397109 NGFRP08138 427 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 ACP2P11117 423 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 CPN1P15169 458 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 DPP4P27487 766 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 C17orf67Q0P5P2 114 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 TRAP1Q12931 704 aaKnown RBP13.23□□□□□ -0.29
SEC13-208ENST00000397109 GANABQ14697 944 aaKnown RBP13.23□□□□□ -0.29
SEC13-208ENST00000397109 DUSP5Q16690 384 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.23□□□□□ -0.29
SEC13-208ENST00000397109 ACSF3Q4G176 576 aaPredicted RBP13.23□□□□□ -0.29
SEC13-208ENST00000397109 EXOSC6Q5RKV6 272 aaKnown RBP13.23□□□□□ -0.29
SEC13-208ENST00000397109 REP15Q6BDI9 236 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 OR5M10Q6IEU7 315 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 LACC1Q8IV20 430 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 COX18Q8N8Q8 333 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 FADS6Q8N9I5 356 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 OR9I1Q8NGQ6 314 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 FAM110BQ8TC76 370 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 WDYHV1Q96HA8 205 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 G6PC3Q9BUM1 346 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 BTBD2Q9BX70 525 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 ACTRT3Q9BYD9 372 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 DSN1Q9H410 356 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 PIGUQ9H490 435 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 PTGES2Q9H7Z7 377 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 SPAG4Q9NPE6 437 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 PCDHGB4Q9UN71 923 aa13.23□□□□□ -0.29
SEC13-208ENST00000397109 FAF1Q9UNN5 650 aaPredicted RBP13.23□□□□□ -0.29
SEC13-208ENST00000397109 A0A0G2JNJ9 132 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 HSPB2A8KAH6 182 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 RNASET2O00584 256 aaKnown RBP13.22□□□□□ -0.29
SEC13-208ENST00000397109 FBP2O00757 339 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 MRASO14807 208 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 SCN2BO60939 215 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 KCNK2O95069 426 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 IGKV1D-16P01601 117 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 IL6P05231 212 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 CHMP24386 653 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 KIR3DL1P43629 444 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 PSME3P61289 254 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 POU6F2P78424 691 aaPredicted RBP13.22□□□□□ -0.29
SEC13-208ENST00000397109 SLC34A1Q06495 639 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 LASP1Q14847 261 aaKnown RBP13.22□□□□□ -0.29
SEC13-208ENST00000397109 HSPB2Q16082 182 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 FAM174BQ3ZCQ3 159 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 SPANXN4Q5MJ08 99 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 SAMD4BQ5PRF9 694 aaKnown RBP13.22□□□□□ -0.29
SEC13-208ENST00000397109 NSUN5P2Q63ZY6 315 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 CDC73Q6P1J9 531 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 ZFP1Q6P2D0 407 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 MSANTD1Q6ZTZ1 278 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 VPS37AQ8NEZ2 397 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 OR2M3Q8NG83 312 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 ZPLD1Q8TCW7 415 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 DUSP19Q8WTR2 217 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 C16orf58Q96GQ5 468 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 SFXN2Q96NB2 322 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 ZBTB18Q99592 522 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 SPOCK3Q9BQ16 436 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 YIPF4Q9BSR8 244 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 CXorf36Q9H7Y0 433 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 CALHM2Q9HA72 323 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 SLC52A3Q9NQ40 469 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 FLRT3Q9NZU0 649 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 Q9UFV3 132 aa13.22□□□□□ -0.29
SEC13-208ENST00000397109 LEF1Q9UJU2 399 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms