RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 ART5Q96L15 291 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 ZNF681Q96N22 645 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 FOXC2Q99958 501 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 ECSITQ9BQ95 431 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 PELOQ9BRX2 385 aaKnown RBP9.41□□□□□ -0.9
NEDD8-202ENST00000396828 SLC35A5Q9BS91 424 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 CLEC4MQ9H2X3 399 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-202ENST00000396828 GSX1Q9H4S2 264 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-202ENST00000396828 C3orf14Q9HBI5 128 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 SLC25A37Q9NYZ2 338 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 TMEM181Q9P2C4 612 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 ST6GALNAC2Q9UJ37 374 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 CBLCQ9ULV8 474 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 PLEKHA6Q9Y2H5 1048 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 PCDHGB3Q9Y5G1 929 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 NPFFR2Q9Y5X5 522 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 ZANQ9Y493 2812 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 TRBV5-3A0A0A0MS03 114 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 RNF103-CHMP3A0A140T963 221 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 ANKRD33BA6NCL7 494 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 OR6C76A6NM76 312 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 A6NNC1 897 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 GNB5O14775 395 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 DYRK3O43781 588 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 NME6O75414 186 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-202ENST00000396828 STAMBPO95630 424 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 EPPINO95925 133 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 HPNP05981 417 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 BMP7P18075 431 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 NT5EP21589 574 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 ME2P23368 584 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 PTPN6P29350 595 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 CASP3P42574 277 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 CCT3P49368 545 aaKnown RBP9.4□□□□□ -0.9
NEDD8-202ENST00000396828 CDK9P50750 372 aaKnown RBP9.4□□□□□ -0.9
NEDD8-202ENST00000396828 MTPNP58546 118 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 MGAT2Q10469 447 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 FUT7Q11130 342 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 NNATQ16517 81 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 RABL3Q5HYI8 236 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 WIPI1Q5MNZ9 446 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-202ENST00000396828 VASNQ6EMK4 673 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 FAM111BQ6SJ93 734 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 SZRD1Q7Z422 152 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 TGIF2LYQ8IUE0 185 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 SLC15A3Q8IY34 581 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 OR56A1Q8NGH5 318 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 OR9A2Q8NGT5 310 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 LINC01560Q8TB33 94 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 SFXN5Q8TD22 340 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 WDYHV1Q96HA8 205 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 ZNF597Q96LX8 424 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 UGT2B28Q9BY64 529 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 ANGPTL4Q9BY76 406 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 PRDM14Q9GZV8 571 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 OR10A5Q9H207 317 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 CXorf36Q9H7Y0 433 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 TPT1P8Q9HAU6 139 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 SLC6A13Q9NSD5 602 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 QPCTLQ9NXS2 382 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 ABCD2Q9UBJ2 740 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 B4GALT7Q9UBV7 327 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 CAMK2AQ9UQM7 478 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 C15orf41Q9Y2V0 281 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 GMEB1Q9Y692 573 aa9.4□□□□□ -0.9
NEDD8-202ENST00000396828 DOCK7Q96N67 2140 aa9.4□□□□□ -0.91
NEDD8-202ENST00000396828 HSPB2A8KAH6 182 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 AHRRA9YTQ3 701 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 H0YHG0 523 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 PLOD2O00469 737 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 NME4O00746 187 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 EMC8O43402 210 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 PDE5AO76074 875 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 IFI6P09912 130 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 HOXB9P17482 250 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-202ENST00000396828 KLK2P20151 261 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 ABCD3P28288 659 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 GALNSP34059 522 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 PTGDSP41222 190 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 ASCL1P50553 236 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 ANXA11P50995 505 aaKnown RBP9.39□□□□□ -0.91
NEDD8-202ENST00000396828 LIPEQ05469 1076 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 DMTNQ08495 405 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 FOXF2Q12947 444 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 FOXD4Q12950 439 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-202ENST00000396828 GAB1Q13480 694 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 TP53BP2Q13625 1128 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 EXOSC7Q15024 291 aaKnown RBP9.39□□□□□ -0.91
NEDD8-202ENST00000396828 HSPB2Q16082 182 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 GTDC1Q4AE62 458 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 FLYWCH1Q4VC44 716 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 TMEM107Q6UX40 140 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 YRDCQ86U90 279 aaKnown RBP9.39□□□□□ -0.91
NEDD8-202ENST00000396828 GALNT12Q8IXK2 581 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 MSRB3Q8IXL7 192 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 DND1Q8IYX4 353 aaKnown RBP9.39□□□□□ -0.91
NEDD8-202ENST00000396828 TAGAPQ8N103 731 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 OR5AK3PQ8NH89 298 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 ZFP90Q8TF47 636 aa9.39□□□□□ -0.91
NEDD8-202ENST00000396828 RNASE6Q93091 150 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms