RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 FAM96BQ9Y3D0 163 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 MN1Q10571 1320 aaPredicted RBP7.93□□□□□ -1.14
NDE1-202ENST00000396355 PRR33A8MZF0 331 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 LRRN3E7EW58 273 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 PEX12O00623 359 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 MAFKO60675 156 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 IGLV3-25P01717 112 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 HLA-DPB1P04440 258 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 RPN2P04844 631 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 HOXB3P14651 431 aaPredicted RBP7.93□□□□□ -1.14
NDE1-202ENST00000396355 MAPK3P27361 379 aaPredicted RBP7.93□□□□□ -1.14
NDE1-202ENST00000396355 HOXC8P31273 242 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 PPM1AP35813 382 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 ASMTP46597 345 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 CRYBB1P53674 252 aaPredicted RBP7.93□□□□□ -1.14
NDE1-202ENST00000396355 CLDN20P56880 219 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 EMX2Q04743 252 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 TGIF1Q15583 401 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 ZNF791Q3KP31 576 aaPredicted RBP7.93□□□□□ -1.14
NDE1-202ENST00000396355 C6orf136Q5SQH8 315 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 SLC9B2Q86UD5 537 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 SIAH3Q8IW03 269 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 GLYATL2Q8WU03 294 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 LRRN3Q9H3W5 708 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 SUV39H2Q9H5I1 410 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 CSNK1G1Q9HCP0 422 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 MAP4K5Q9Y4K4 846 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 NUBP2Q9Y5Y2 271 aa7.93□□□□□ -1.14
NDE1-202ENST00000396355 A0A0G2JN53 185 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 MEIS3P1A6NDR6 274 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 ARL5CA6NH57 179 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 IQCF5A8MTL0 148 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 RNF13O43567 381 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 NDUFA2O43678 99 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 ENTPD6O75354 484 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 FBXO24O75426 580 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 UBXN7O94888 489 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 HLA-DQB2P05538 268 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 OR4Q2P0C623 313 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 ACADMP11310 421 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 CD52P31358 61 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 CDC42EP1Q00587 391 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 PTPRNQ16849 979 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 OR4F3Q6IEY1 312 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 NDUFAF7Q7L592 441 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 MEX3DQ86XN8 651 aaKnown RBP7.92□□□□□ -1.14
NDE1-202ENST00000396355 ARMC10Q8N2F6 343 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 CELF5Q8N6W0 485 aaKnown RBP7.92□□□□□ -1.14
NDE1-202ENST00000396355 ZNF321PQ8N8H1 164 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 OR10H4Q8NGA5 316 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 THRSPQ92748 146 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 MED8Q96G25 268 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 LRFN5Q96NI6 719 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 RPS6KB2Q9UBS0 482 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 GPR52Q9Y2T5 361 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 MMP24Q9Y5R2 645 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 MAP1BP46821 2468 aaKnown RBP7.92□□□□□ -1.14
NDE1-202ENST00000396355 TTC24A2A3L6 582 aaPredicted RBP7.92□□□□□ -1.14
NDE1-202ENST00000396355 IFNA2P01563 188 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 DCNP07585 359 aaKnown RBP7.92□□□□□ -1.14
NDE1-202ENST00000396355 ANXA8P13928 327 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 NOS3P29474 1203 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 PRDX3P30048 256 aaKnown RBP7.92□□□□□ -1.14
NDE1-202ENST00000396355 ADRA1AP35348 466 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 SLC1A3P43003 542 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 PITPNBP48739 271 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 PTH2RP49190 550 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 SPCS3P61009 180 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 SKP1P63208 163 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 CREB5Q02930 508 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 FOXM1Q08050 763 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 RBBP4Q09028 425 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 FAAP20Q6NZ36 180 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 CEACAM20Q6UY09 585 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 HACD2Q6Y1H2 254 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 CYHR1Q6ZMK1 362 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 OR11H7Q8NGC8 314 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 TERB2Q8NHR7 220 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 LINC01599Q8WXQ3 324 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 OR8D1Q8WZ84 308 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 FAIM2Q9BWQ8 316 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 SHARPINQ9H0F6 387 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 BCO1Q9HAY6 547 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 TLR9Q9NR96 1032 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 GSKIPQ9P0R6 139 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 IL20RAQ9UHF4 553 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 TRPV2Q9Y5S1 764 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 UNC80Q8N2C7 3258 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 SCN10AQ9Y5Y9 1956 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 TMEM235A6NFC5 223 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 CLIC1O00299 241 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 BHLHE40O14503 412 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 GFRA3O60609 400 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 GLUD1P00367 558 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 CD80P33681 288 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 HCCSP53701 268 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 ZXDBP98169 803 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 INTS6LQ5JSJ4 861 aaKnown RBP7.92□□□□□ -1.14
NDE1-202ENST00000396355 MANEALQ5VSG8 457 aa7.92□□□□□ -1.14
NDE1-202ENST00000396355 CD300LGQ6UXG3 332 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms