RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 RNF144AP50876 292 aaPredicted RBP13.86□□□□□ -0.19
PTPN20-206ENST00000395722 SSR4P51571 173 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 SOX8P57073 446 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 GK3PQ14409 553 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 ATP1A1-AS1Q5TC04 95 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 LPCAT4Q643R3 524 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 FCRLBQ6BAA4 426 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 DEF8Q6ZN54 512 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 GRHL3Q8TE85 626 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 NR4A3Q92570 626 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 THOC3Q96J01 351 aaKnown RBP13.86□□□□□ -0.19
PTPN20-206ENST00000395722 PRRC1Q96M27 445 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 NODALQ96S42 347 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 RTN4RQ9BZR6 473 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 EXOSC3Q9NQT5 275 aaKnown RBP13.86□□□□□ -0.19
PTPN20-206ENST00000395722 SSUH2Q9Y2M2 353 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 FAM32AQ9Y421 112 aaKnown RBP13.86□□□□□ -0.19
PTPN20-206ENST00000395722 AKAP13Q12802 2813 aa13.86□□□□□ -0.19
PTPN20-206ENST00000395722 OR6B1O95007 311 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 CSTAP01040 98 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 PRG2P13727 222 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 HPGDP15428 266 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 ENDOUP21128 410 aaKnown RBP13.85□□□□□ -0.19
PTPN20-206ENST00000395722 ACAA2P42765 397 aaKnown RBP13.85□□□□□ -0.19
PTPN20-206ENST00000395722 YAP1P46937 504 aaKnown RBP13.85□□□□□ -0.19
PTPN20-206ENST00000395722 LIMS1P48059 325 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 HMGA2P52926 109 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 SKP2Q13309 424 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 TMEM81Q6P7N7 255 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 TMEM179BQ7Z7N9 219 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 CYP4Z1Q86W10 505 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 ZNF248Q8NDW4 579 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 PIK3C3Q8NEB9 887 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 OR4C15Q8NGM1 316 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 KCNE4Q8WWG9 221 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 NTNG2Q96CW9 530 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 TMCO6Q96DC7 493 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 EPYCQ99645 322 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 POLR2J2Q9GZM3 115 aaKnown RBP13.85□□□□□ -0.19
PTPN20-206ENST00000395722 POLR2J3Q9H1A7 115 aaKnown RBP13.85□□□□□ -0.19
PTPN20-206ENST00000395722 ACER3Q9NUN7 267 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 TESQ9UGI8 421 aaKnown RBP13.85□□□□□ -0.19
PTPN20-206ENST00000395722 OAZ3Q9UMX2 235 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 LYVE1Q9Y5Y7 322 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 ZNF891A8MT65 544 aaPredicted RBP13.85□□□□□ -0.19
PTPN20-206ENST00000395722 OIP5O43482 229 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 ADAM11O75078 769 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 UBL4AP11441 157 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 RRM2P31350 389 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 VHLP40337 213 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 IST1P53990 364 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 GAS1P54826 345 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 ACER2Q5QJU3 275 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 ZNF550Q7Z398 422 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 ZNF440Q8IYI8 595 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 SVOPLQ8N434 492 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 ICA1LQ8NDH6 482 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 OR10G3Q8NGC4 313 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 OR5K1Q8NHB7 308 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 NRBF2Q96F24 287 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 SECISBP2Q96T21 854 aaKnown RBP13.85□□□□□ -0.19
PTPN20-206ENST00000395722 MCHR1Q99705 422 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 FUZQ9BT04 418 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 DPH1Q9BZG8 443 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 LHPPQ9H008 270 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 REEP1Q9H902 201 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 SH2D2AQ9NP31 389 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 TESMINQ9Y4I5 508 aa13.85□□□□□ -0.19
PTPN20-206ENST00000395722 SAC3D1A6NKF1 404 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 H3BNH8 94 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 GNGT2O14610 69 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 GKN3PP0CG01 181 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 FPR1P21462 350 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 FUT4P22083 530 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 HTR2AP28223 471 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 DNAJA1P31689 397 aaKnown RBP13.84□□□□□ -0.19
PTPN20-206ENST00000395722 RRADP55042 308 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 HOXC5Q00444 222 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 MEP1AQ16819 746 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 B3GNTL1Q67FW5 361 aaPredicted RBP13.84□□□□□ -0.19
PTPN20-206ENST00000395722 SHQ1Q6PI26 577 aaKnown RBP13.84□□□□□ -0.19
PTPN20-206ENST00000395722 MARCH3Q86UD3 253 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 RANBP3LQ86VV4 465 aaPredicted RBP13.84□□□□□ -0.19
PTPN20-206ENST00000395722 OFCC1Q8IZS5 231 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 SIRT6Q8N6T7 355 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 CLEC1AQ8NC01 280 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 CATSPER1Q8NEC5 780 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 ASB15Q8WXK1 588 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 CIB1Q99828 191 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 PRR14Q9BWN1 585 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 TBL1XR1Q9BZK7 514 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 LAT2Q9GZY6 243 aa13.84□□□□□ -0.19
PTPN20-206ENST00000395722 NMNAT1Q9HAN9 279 aaPredicted RBP13.84□□□□□ -0.19
PTPN20-206ENST00000395722 SAMHD1Q9Y3Z3 626 aaKnown RBP13.84□□□□□ -0.19
PTPN20-206ENST00000395722 CHCHD2Q9Y6H1 151 aaPredicted RBP13.84□□□□□ -0.19
PTPN20-206ENST00000395722 AP3D1O14617 1153 aa13.83□□□□□ -0.19
PTPN20-206ENST00000395722 EFSO43281 561 aa13.83□□□□□ -0.19
PTPN20-206ENST00000395722 ZNF264O43296 627 aa13.83□□□□□ -0.19
PTPN20-206ENST00000395722 EIF4E2O60573 245 aaKnown RBP13.83□□□□□ -0.19
PTPN20-206ENST00000395722 OR5F1O95221 314 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms