RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 PKLRP30613 574 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 MPIP34949 423 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 GJA4P35212 333 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 GCGRP47871 477 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 MTNR1BP49286 362 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 ARFIP1P53367 373 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 RAB8AP61006 207 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 PDGFRLQ15198 375 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 SLC37A3Q8NCC5 494 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 GANCQ8TET4 914 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 AKAP1Q92667 903 aaKnown RBP eCLIP17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 CREB3L1Q96BA8 519 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 ART5Q96L15 291 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 HDAC8Q9BY41 377 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 HDHD2Q9H0R4 259 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 TRPV5Q9NQA5 729 aa17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 MBNL1Q9NR56 388 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-202ENST00000394633 TICRRQ7Z2Z1 1910 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 C12orf71A8MTZ7 269 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 OR5F1O95221 314 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 PAHP00439 452 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 TFPIP10646 304 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 AHRP35869 848 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 SOX9P48436 509 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 RNF144AP50876 292 aaPredicted RBP17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 C19orf57Q0VDD7 668 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 COL19A1Q14993 1142 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 CCDC85BQ15834 202 aaPredicted RBP17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 PLBD1Q6P4A8 553 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 IL20RBQ6UXL0 311 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 FBXL6Q8N531 539 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 DTX3Q8N9I9 347 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 OR5M3Q8NGP4 307 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 OR2L8Q8NGY9 312 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 ACTRT3Q9BYD9 372 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 PPIL3Q9H2H8 161 aaKnown RBP17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 UBQLN3Q9H347 655 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 MED20Q9H944 212 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 CYSLTR2Q9NS75 346 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 APOBEC3BQ9UH17 382 aaKnown RBP17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 PHF11Q9UIL8 331 aa17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 ZNF443Q9Y2A4 671 aaPredicted RBP17.08■□□□□ 0.33
PCDHA1-202ENST00000394633 ZGLP1P0C6A0 271 aa17.08■□□□□ 0.32
PCDHA1-202ENST00000394633 BDH1Q02338 343 aa17.08■□□□□ 0.32
PCDHA1-202ENST00000394633 CEBPEQ15744 281 aa17.08■□□□□ 0.32
PCDHA1-202ENST00000394633 FAM111BQ6SJ93 734 aa17.08■□□□□ 0.32
PCDHA1-202ENST00000394633 FRRS1Q6ZNA5 592 aa17.08■□□□□ 0.32
PCDHA1-202ENST00000394633 TMEM99Q8N816 258 aa17.08■□□□□ 0.32
PCDHA1-202ENST00000394633 ELSPBP1Q96BH3 223 aa17.08■□□□□ 0.32
PCDHA1-202ENST00000394633 TBX5Q99593 518 aa17.08■□□□□ 0.32
PCDHA1-202ENST00000394633 ALG8Q9BVK2 526 aa17.08■□□□□ 0.32
PCDHA1-202ENST00000394633 SLC7A7Q9UM01 511 aa17.08■□□□□ 0.32
PCDHA1-202ENST00000394633 C1QTNF3-AMACRE9PGA6 284 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 EIF4EP06730 217 aaKnown RBP17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 SLC6A1P30531 599 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 THBS2P35442 1172 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 CLDN2P57739 230 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 STXBP1P61764 594 aaKnown RBP17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 DBPQ10586 325 aaPredicted RBP17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 PUS10Q3MIT2 529 aaKnown RBP17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 HBMQ6B0K9 141 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 HEPHL1Q6MZM0 1159 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 NIPAL3Q6P499 406 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 ASB18Q6ZVZ8 466 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 CACUL1Q86Y37 369 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 YAF2Q8IY57 180 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 ACBD7Q8N6N7 88 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 RAB7BQ96AH8 199 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 TEX101Q9BY14 249 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 KCNN2Q9H2S1 579 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 BABAM2Q9NXR7 383 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 NLGN3Q9NZ94 848 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 KCNK6Q9Y257 313 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 HSPB11Q9Y547 144 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 MUC3AQ02505 3323 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 DNAH14Q0VDD8 3507 aa17.07■□□□□ 0.32
PCDHA1-202ENST00000394633 PRICKLE3O43900 615 aaPredicted RBP17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 FUT1P19526 365 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 SHC1P29353 583 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 ATP12AP54707 1039 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 BTG1P62324 171 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 PLA1AQ53H76 456 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 LRRC28Q86X40 367 aaPredicted RBP17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 GID4Q8IVV7 300 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 SLC16A11Q8NCK7 471 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 ADAMTS15Q8TE58 950 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 CDS1Q92903 461 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 NACC2Q96BF6 587 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 ENAMQ9NRM1 1142 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 PLEKHM1Q9Y4G2 1056 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 HK1P19367 917 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 TBXA2RP21731 343 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 PEBP1P30086 187 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 P2RX3P56373 397 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 FXYD6P3P58550 94 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 MRPL28Q13084 256 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 AGERQ15109 404 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 ZNF836Q6ZNA1 936 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 CREB3L2Q70SY1 520 aa17.06■□□□□ 0.32
PCDHA1-202ENST00000394633 OR52E1Q8NGJ3 308 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms