RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 SMARCD3Q6STE5 483 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 ARIH2OSQ8N7S6 290 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 TOR1AIP2Q8NFQ8 470 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 FAM3CQ92520 227 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 CTRCQ99895 268 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 NKX2-4Q9H2Z4 354 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 MARCH7Q9H992 704 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 NEK6Q9HC98 313 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 KRCC1Q9NPI7 259 aaPredicted RBP15.48■□□□□ 0.07
PRDM5-202ENST00000394435 EVA1BQ9NVM1 165 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 ZNF223Q9UK11 482 aaPredicted RBP15.48■□□□□ 0.07
PRDM5-202ENST00000394435 FANCMQ8IYD8 2048 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 AKAP8O43823 692 aaKnown RBP15.48■□□□□ 0.07
PRDM5-202ENST00000394435 STX11O75558 287 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 GSTT2P0CG29 244 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 GSTT2BP0CG30 244 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 IFI30P13284 250 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 SRP54P61011 504 aaKnown RBP15.48■□□□□ 0.07
PRDM5-202ENST00000394435 ALG11Q2TAA5 492 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 ZNF322Q6U7Q0 402 aaPredicted RBP15.48■□□□□ 0.07
PRDM5-202ENST00000394435 TRIM48Q8IWZ4 208 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 COX18Q8N8Q8 333 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 GDPD1Q8N9F7 314 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 PHOX2BQ99453 314 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 ZFYVE21Q9BQ24 234 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 LMAN2LQ9H0V9 348 aa15.48■□□□□ 0.07
PRDM5-202ENST00000394435 C11orf54Q9H0W9 315 aaPredicted RBP15.48■□□□□ 0.07
PRDM5-202ENST00000394435 ISG20L2Q9H9L3 353 aaKnown RBP15.48■□□□□ 0.07
PRDM5-202ENST00000394435 C2orf92A0A1B0GVN3 265 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 HPGDSO60760 199 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 KRT8P05787 483 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 DBIP07108 87 aaKnown RBP15.47■□□□□ 0.07
PRDM5-202ENST00000394435 HOXD12P35452 270 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 SHC2P98077 582 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 FZD5Q13467 585 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 ASAH1Q13510 395 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 VASNQ6EMK4 673 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 TMEM53Q6P2H8 277 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 SFTPA2Q8IWL1 248 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 UBE2J2Q8N2K1 259 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 ATP6V1C2Q8NEY4 427 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 OR6F1Q8NGZ6 308 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 OR52N1Q8NH53 320 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 FANK1Q8TC84 345 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 CAPSLQ8WWF8 208 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 RERGQ96A58 199 aaPredicted RBP15.47■□□□□ 0.07
PRDM5-202ENST00000394435 ZNF486Q96H40 463 aaPredicted RBP15.47■□□□□ 0.07
PRDM5-202ENST00000394435 ART5Q96L15 291 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 TBX5Q99593 518 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 SLC22A4Q9H015 551 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 FBRSQ9HAH7 460 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 SIDT1Q9NXL6 827 aaKnown RBP15.47■□□□□ 0.07
PRDM5-202ENST00000394435 MALT1Q9UDY8 824 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 ZNF221Q9UK13 617 aa15.47■□□□□ 0.07
PRDM5-202ENST00000394435 DVL2O14641 736 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 CHST10O43529 356 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 LYPD3O95274 346 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 HLA-DPB1P04440 258 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 ZNF10P21506 573 aaPredicted RBP15.46■□□□□ 0.07
PRDM5-202ENST00000394435 RPS4Y1P22090 263 aaKnown RBP15.46■□□□□ 0.07
PRDM5-202ENST00000394435 APEX1P27695 318 aaKnown RBP15.46■□□□□ 0.07
PRDM5-202ENST00000394435 RCVRNP35243 200 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 SF3B4Q15427 424 aaKnown RBP eCLIP15.46■□□□□ 0.07
PRDM5-202ENST00000394435 ATAD3CQ5T2N8 411 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 NLGN4YQ8NFZ3 816 aaPredicted RBP15.46■□□□□ 0.07
PRDM5-202ENST00000394435 NEIL3Q8TAT5 605 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 BRIX1Q8TDN6 353 aaKnown RBP15.46■□□□□ 0.07
PRDM5-202ENST00000394435 TMEM239Q8WW34 195 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 MRGPRX1Q96LB2 322 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 HS6ST2Q96MM7 605 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 ATF6BQ99941 703 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 CAPN10Q9HC96 672 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 GXYLT2A0PJZ3 443 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 SYNDIG1LA6NDD5 238 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 A8MV72 311 aaPredicted RBP15.46■□□□□ 0.07
PRDM5-202ENST00000394435 CT62P0C5K7 136 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 NID1P14543 1247 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 HNRNPA2B1P22626 353 aaKnown RBP15.46■□□□□ 0.07
PRDM5-202ENST00000394435 CTHP32929 405 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 PPP3R1P63098 170 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 ACSM1Q08AH1 577 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 CD180Q99467 661 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 HCAR1Q9BXC0 346 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 LYRM4Q9HD34 91 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 STARD5Q9NSY2 213 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 SCML1Q9UN30 329 aa15.46■□□□□ 0.07
PRDM5-202ENST00000394435 NDRG2Q9UN36 371 aaKnown RBP15.46■□□□□ 0.07
PRDM5-202ENST00000394435 MEIOCA2RUB1 952 aa15.45■□□□□ 0.06
PRDM5-202ENST00000394435 C12orf71A8MTZ7 269 aa15.45■□□□□ 0.06
PRDM5-202ENST00000394435 J3QRE1 110 aa15.45■□□□□ 0.06
PRDM5-202ENST00000394435 GABRA3P34903 492 aa15.45■□□□□ 0.06
PRDM5-202ENST00000394435 IFITM2Q01629 132 aa15.45■□□□□ 0.06
PRDM5-202ENST00000394435 EOGTQ5NDL2 527 aa15.45■□□□□ 0.06
PRDM5-202ENST00000394435 EXOSC6Q5RKV6 272 aaKnown RBP15.45■□□□□ 0.06
PRDM5-202ENST00000394435 NIPAL3Q6P499 406 aa15.45■□□□□ 0.06
PRDM5-202ENST00000394435 CNIH2Q6PI25 160 aa15.45■□□□□ 0.06
PRDM5-202ENST00000394435 TMEM184AQ6ZMB5 413 aa15.45■□□□□ 0.06
PRDM5-202ENST00000394435 TMEM91Q6ZNR0 172 aa15.45■□□□□ 0.06
PRDM5-202ENST00000394435 GATAD2AQ86YP4 633 aa15.45■□□□□ 0.06
PRDM5-202ENST00000394435 TMEM99Q8N816 258 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms