RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CYB561A3Q8NBI2 242 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 ANKK1Q8NFD2 765 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 SMAP2Q8WU79 429 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-203ENST00000394269 SHDQ96IW2 340 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 DHRS1Q96LJ7 313 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 POLE4Q9NR33 117 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 SPIN1Q9Y657 262 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-203ENST00000394269 PMF1-BGLAPU3KQ54 211 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 CACNA1CQ13936 2221 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 CHURC1-FNTBB4DL54 471 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 CLDN25C9JDP6 229 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 KIAA0513O60268 411 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 NID1P14543 1247 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 BMP7P18075 431 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 OMPP47874 163 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 EMDP50402 254 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 MGAT2Q10469 447 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 TSPAN31Q12999 210 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 VWA2Q5GFL6 755 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 SLC46A3Q7Z3Q1 461 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 IGFN1Q86VF2 1251 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 CPOQ8IVL8 374 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 CDK20Q8IZL9 346 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 OR4C3Q8NH37 302 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 DACH2Q96NX9 599 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 IFT27Q9BW83 186 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 TEX12Q9BXU0 123 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 TTTY10Q9BZA0 68 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 ZNF350Q9GZX5 532 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 FOLH1BQ9HBA9 442 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 TMEM27Q9HBJ8 222 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 PLCL2Q9UPR0 1127 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 LRRN3E7EW58 273 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 ETV5P41161 510 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 ETV1P50549 477 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 ZNF136P52737 540 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 CDH11P55287 796 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 SKP1P63208 163 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 DUSP8Q13202 625 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 C1DQ13901 141 aaKnown RBP10.32□□□□□ -0.76
TCOF1-203ENST00000394269 GXYLT1Q4G148 440 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 EIPR1Q53HC9 387 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 MANEAQ5SRI9 462 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 FHL5Q5TD97 284 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 C12orf73Q69YU5 71 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 PLBD1Q6P4A8 553 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 RBM12BQ8IXT5 1001 aaKnown RBP10.32□□□□□ -0.76
TCOF1-203ENST00000394269 GPR135Q8IZ08 494 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 ZNF321PQ8N8H1 164 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 PSD4Q8NDX1 1056 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 OR9Q1Q8NGQ5 310 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 C16orf52Q8NHV5 167 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 TMEM239Q8WW34 195 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 C1GALT1C1Q96EU7 318 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 ZDHHC12Q96GR4 267 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 DPYSL5Q9BPU6 564 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 FUZQ9BT04 418 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 LRRN3Q9H3W5 708 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 ABCB10Q9NRK6 738 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 DUSP22Q9NRW4 184 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 ATXN7L1Q9ULK2 861 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-203ENST00000394269 CLCA3PQ9Y6N3 262 aa10.32□□□□□ -0.76
TCOF1-203ENST00000394269 TRAPPC13A5PLN9 417 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 CDHR4A6H8M9 788 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 C17orf105B2RV13 164 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 LMO7DNF2Z398 122 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 CCRL2O00421 344 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 CSO75390 466 aaKnown RBP10.31□□□□□ -0.76
TCOF1-203ENST00000394269 IGKV1D-16P01601 117 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 FASLGP48023 281 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 MTNR1AP48039 350 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 TGM4P49221 684 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 FNTBP49356 437 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 EEF1A1P68104 462 aaKnown RBP10.31□□□□□ -0.76
TCOF1-203ENST00000394269 DESI1Q6ICB0 168 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 C10orf53Q8N6V4 93 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 OR51G2Q8NGK0 314 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 OR13C2Q8NGS9 318 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 OR4Q3Q8NH05 313 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 DYNC2LI1Q8TCX1 351 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 TSLPQ969D9 159 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 MSANTD3Q96H12 275 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 SIGLEC11Q96RL6 698 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 HMG20AQ9NP66 347 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 SNTG1Q9NSN8 517 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 YARS2Q9Y2Z4 477 aaKnown RBP10.31□□□□□ -0.76
TCOF1-203ENST00000394269 SIT1Q9Y3P8 196 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 WDFY3Q8IZQ1 3526 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 LINC00854A0A1B0GVQ3 168 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 CTNSO60931 367 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 ADAM11O75078 769 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 GYPBP06028 91 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 TSPAN19P0C672 248 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 MAKP20794 623 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 ACVR2AP27037 513 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 CSTF2P33240 577 aaKnown RBP eCLIP10.31□□□□□ -0.76
TCOF1-203ENST00000394269 SNRPGP62308 76 aaKnown RBP10.31□□□□□ -0.76
TCOF1-203ENST00000394269 FAM53BQ14153 422 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 C14orf28Q4W4Y0 310 aa10.31□□□□□ -0.76
TCOF1-203ENST00000394269 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms