RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ZNF41P51814 821 aaPredicted RBP15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 MANFP55145 182 aaKnown RBP15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 SLC18A2Q05940 514 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 EXOC3L2Q2M3D2 409 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 MFSD12Q6NUT3 480 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 ZNF704Q6ZNC4 412 aaPredicted RBP15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 Q6ZSR9 355 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 SLC16A11Q8NCK7 471 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 TMEM171Q8WVE6 324 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 PPCDCQ96CD2 204 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 HDHD5Q9BXW7 423 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 TBK1Q9UHD2 729 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 HEATR5AQ86XA9 2040 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 TLN2Q9Y4G6 2542 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 UQCRHLA0A096LP55 91 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 SHISA8B8ZZ34 492 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 CNOT4O95628 575 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 CPA3P15088 417 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 HPGDP15428 266 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 SDC1P18827 310 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 ELK4P28324 431 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 ADH6P28332 368 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 ASMTP46597 345 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 ZNF385BQ569K4 471 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 LIPMQ5VYY2 423 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 ANKRD34AQ69YU3 496 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 ADAM5Q6NVV9 412 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 MTERF4Q7Z6M4 381 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 GALNT10Q86SR1 603 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 TDRPQ86YL5 185 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 CEP112Q8N8E3 955 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 EIF1ADQ8N9N8 165 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 SLC9A6Q92581 669 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 CIDECQ96AQ7 238 aaPredicted RBP15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 RNF145Q96MT1 663 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 STACQ99469 402 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 USB1Q9BQ65 265 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 DUSP22Q9NRW4 184 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 ROS1P08922 2347 aa15.63■□□□□ 0.09
SNRPA1-202ENST00000394082 A0A0J9YW62 118 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 KIF2AO00139 706 aaPredicted RBP15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 SCDO00767 359 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 HS3ST1O14792 307 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 AZIN1O14977 448 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 CXCL13O43927 109 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 TUBBP07437 444 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 ALOX5P09917 674 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 LINGO3P0C6S8 592 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 FAM153BP0C7A2 387 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 ACP2P11117 423 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 AGTR1P30556 359 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 PRIM2P49643 509 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 PRKAG1P54619 331 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 RNPS1Q15287 305 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 DUSP5Q16690 384 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 FAM153CQ494X1 144 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 HBMQ6B0K9 141 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 LRIG3Q6UXM1 1119 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 R3HCC1LQ7Z5L2 792 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 STEAP2Q8NFT2 490 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 KLHL15Q96M94 604 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 BTBD2Q9BX70 525 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 ACTR6Q9GZN1 396 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 TIGARQ9NQ88 270 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 SH3BP4Q9P0V3 963 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 MID2Q9UJV3 735 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 ACTL7BQ9Y614 415 aa15.62■□□□□ 0.09
SNRPA1-202ENST00000394082 TRIM64A6NGJ6 449 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 TRIM64BA6NI03 449 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 TNFSF11O14788 317 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 LSM1O15116 133 aaKnown RBP15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 CHEK2O96017 543 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 FGF4P08620 206 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 SUMO3P55854 103 aaPredicted RBP15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 CARD18P57730 90 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 ETFDHQ16134 617 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 RFTN2Q52LD8 501 aaPredicted RBP15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 CLEC6AQ6EIG7 209 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 ANKRD26P1Q6NSI1 321 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 FIGNL1Q6PIW4 674 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 PRIMA1Q86XR5 153 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 LILRA2Q8N149 483 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 OR2T11Q8NH01 316 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 B4GALNT2Q8NHY0 566 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 POC1BQ8TC44 478 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 RNF128Q8TEB7 428 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 OSTF1Q92882 214 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 CPNE4Q96A23 557 aaPredicted RBP15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 PLPPR2Q96GM1 343 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 NPAS1Q99742 590 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 HOXD1Q9GZZ0 328 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 CLEC4AQ9UMR7 237 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 SNX8Q9Y5X2 465 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 CSPG4Q6UVK1 2322 aa15.61■□□□□ 0.09
SNRPA1-202ENST00000394082 GJE1A6NN92 205 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 GMFGO60234 142 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 RPL3P39023 403 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 POU6F2P78424 691 aaPredicted RBP15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 PPP2R2BQ00005 443 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 ZNF239Q16600 458 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms