RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 JMJD7P0C870 316 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 PTNP21246 168 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 HTR2AP28223 471 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 ETV5P41161 510 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 IDH2P48735 452 aaKnown RBP7.96□□□□□ -1.13
TDP1-203ENST00000393454 CRISP1P54107 249 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 ESRRGP62508 458 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 LSM11P83369 360 aaKnown RBP eCLIP7.96□□□□□ -1.13
TDP1-203ENST00000393454 ALDH6A1Q02252 535 aaKnown RBP7.96□□□□□ -1.13
TDP1-203ENST00000393454 PLCXD2Q0VAA5 305 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 CDK5R2Q13319 367 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 ILKQ13418 452 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 CSRP2Q16527 193 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 ZSWIM7Q19AV6 140 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 ISXQ2M1V0 245 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 NDUFAF6Q330K2 333 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 KCTD21Q4G0X4 260 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 C6orf141Q5SZD1 244 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 FAM69BQ5VUD6 431 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 AP1ARQ63HQ0 302 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 MRPL14Q6P1L8 145 aaKnown RBP7.96□□□□□ -1.13
TDP1-203ENST00000393454 HSDL2Q6YN16 418 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 ZNF550Q7Z398 422 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 PRICKLE2Q7Z3G6 844 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 NLGN4XQ8N0W4 816 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 ZNF527Q8NB42 609 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 BPIFB6Q8NFQ5 453 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 PIGXQ8TBF5 258 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 FAM81AQ8TBF8 368 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 GRHL3Q8TE85 626 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 THAP3Q8WTV1 239 aaPredicted RBP7.96□□□□□ -1.13
TDP1-203ENST00000393454 HRASLS5Q96KN8 279 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 DGCR6LQ9BY27 220 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 YTHDF1Q9BYJ9 559 aaKnown RBP7.96□□□□□ -1.13
TDP1-203ENST00000393454 ANKRD19PQ9H560 264 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 EVA1AQ9H8M9 152 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 UBQLN4Q9NRR5 601 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 DNAJB12Q9NXW2 375 aaKnown RBP7.96□□□□□ -1.13
TDP1-203ENST00000393454 TESQ9UGI8 421 aaKnown RBP7.96□□□□□ -1.13
TDP1-203ENST00000393454 NXT1Q9UKK6 140 aaKnown RBP7.96□□□□□ -1.13
TDP1-203ENST00000393454 PTRH2Q9Y3E5 179 aaKnown RBP7.96□□□□□ -1.13
TDP1-203ENST00000393454 HSPE1-MOB4S4R3N1 261 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 TRBV11-1A0A0K0K1C0 115 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 A6NHS1 94 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 NPIPB9F8W1W9 429 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 GTPBP1O00178 669 aaKnown RBP7.96□□□□□ -1.14
TDP1-203ENST00000393454 MT-CO3P00414 261 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 THY1P04216 161 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 IGFBP1P08833 259 aaPredicted RBP7.96□□□□□ -1.14
TDP1-203ENST00000393454 OSMP13725 252 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 MMP11P24347 488 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 CHMP24386 653 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 FMO3P31513 532 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 GGT2P36268 569 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 GPR143P51810 404 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 NUP107P57740 925 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 RAB15P59190 212 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 RNF4P78317 190 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 PTGES3Q15185 160 aaKnown RBP7.96□□□□□ -1.14
TDP1-203ENST00000393454 RBM48Q5RL73 367 aaKnown RBP7.96□□□□□ -1.14
TDP1-203ENST00000393454 TMEM236Q5W0B7 351 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 DHRS13Q6UX07 377 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 ZER1Q7Z7L7 766 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 APLFQ8IW19 511 aaPredicted RBP7.96□□□□□ -1.14
TDP1-203ENST00000393454 CMIPQ8IY22 773 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 SLC34A3Q8N130 599 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 PARP8Q8N3A8 854 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 CADM2Q8N3J6 435 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 PHOSPHO1Q8TCT1 267 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 GNPDA2Q8TDQ7 276 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 TMEM255BQ8WV15 326 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 ACOT11Q8WXI4 607 aaPredicted RBP7.96□□□□□ -1.14
TDP1-203ENST00000393454 HDAC2Q92769 488 aaKnown RBP7.96□□□□□ -1.14
TDP1-203ENST00000393454 UBE2FQ969M7 185 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 FAM46AQ96IP4 442 aaKnown RBP7.96□□□□□ -1.14
TDP1-203ENST00000393454 LRFN5Q96NI6 719 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 PHOX2BQ99453 314 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 PITX2Q99697 317 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 POLR2J2Q9GZM3 115 aaKnown RBP7.96□□□□□ -1.14
TDP1-203ENST00000393454 WDR54Q9H977 334 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 POLR1BQ9H9Y6 1135 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 PARD6AQ9NPB6 346 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 FAM86C1Q9NVL1 165 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 IMPAD1Q9NX62 359 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 RPS6KB2Q9UBS0 482 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 PCDHGA6Q9Y5G7 932 aa7.96□□□□□ -1.14
TDP1-203ENST00000393454 COL27A1Q8IZC6 1860 aaPredicted RBP7.95□□□□□ -1.14
TDP1-203ENST00000393454 A0A087WXM4 84 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 PMS2P1A4D2B8 440 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 FMO6PO60774 539 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 ICOSLGO75144 302 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 STK17BO94768 372 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 ANGPTL1O95841 491 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 GSTM3P21266 225 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 CCR4P51679 360 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 NRG3P56975 720 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 PLAURQ03405 335 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 TCF15Q12870 199 aa7.95□□□□□ -1.14
TDP1-203ENST00000393454 TOP3AQ13472 1001 aaPredicted RBP7.95□□□□□ -1.14
TDP1-203ENST00000393454 MAD2L1BPQ15013 274 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms