RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 P2RX5Q93086 422 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 AJUBAQ96IF1 538 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 MAPKAP1Q9BPZ7 522 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 PSD2Q9BQI7 771 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 KLHL31Q9H511 634 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 WDR55Q9H6Y2 383 aaPredicted RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.25□□□□□ -1.89
XRN1-202ENST00000392981 UBN2Q6ZU65 1347 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 TRBV4-1A0A0J9YWV2 114 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 NEDD8-MDP1E9PL57 170 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ZNF264O43296 627 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 CLIC3O95833 236 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 CHRNB1P11230 501 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 NR2C1P13056 603 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 CASP4P49662 377 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 UBE2IP63279 158 aaKnown RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 DLG1Q12959 904 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 MOGAT2Q3SYC2 334 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 DNAL1Q4LDG9 190 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 NEPROQ6NW34 567 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 DTX1Q86Y01 620 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ERO1BQ86YB8 467 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 TBC1D19Q8N5T2 526 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 MFSD9Q8NBP5 474 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 OR7A2PQ8NGA2 310 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 OR14A16Q8NHC5 309 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 P3H4Q92791 437 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ULBP2Q9BZM5 246 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 NAA50Q9GZZ1 169 aaKnown RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 RBKSQ9H477 322 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 SP140LQ9H930 580 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 PLGRKTQ9HBL7 147 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 LPAR2Q9HBW0 351 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 MOV10Q9HCE1 1003 aaKnown RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 SLC52A3Q9NQ40 469 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ZDHHC18Q9NUE0 388 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 PEF1Q9UBV8 284 aaKnown RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 IKZF3Q9UKT9 509 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 B9D1Q9UPM9 204 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 E9PCH4 1651 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 PDS5AQ29RF7 1337 aaKnown RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 NLRP1Q9C000 1473 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 TMEM210A6NLX4 147 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ZNF732B4DXR9 585 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 DIRC3C9JPN6 131 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 LDB2O43679 373 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 CDC40O60508 579 aaKnown RBP eCLIP3.25□□□□□ -1.89
XRN1-202ENST00000392981 RCBTB2O95199 551 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 PAPSS2O95340 614 aaPredicted RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 GPX3P22352 226 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 RPL9P32969 192 aaKnown RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 PHBP35232 272 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 TMED10P49755 219 aaKnown RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 HMGCS2P54868 508 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ATP6V0D1P61421 351 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 RBM39Q14498 530 aaKnown RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 ELAVL3Q14576 367 aaKnown RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 SLC15A2Q16348 729 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 NDUFAF6Q330K2 333 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 GLYR1Q49A26 553 aaPredicted RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 MTX3Q5HYI7 312 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 PAPPA-AS1Q5QFB9 102 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 DMKNQ6E0U4 476 aaPredicted RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 SPOPLQ6IQ16 392 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ZSCAN4Q8NAM6 433 aaPredicted RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 OR2AK2Q8NG84 335 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ZNF502Q8TBZ5 544 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ART4Q93070 314 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ZNF479Q96JC4 524 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 NTN4Q9HB63 628 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 LYRM4Q9HD34 91 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 DLL3Q9NYJ7 618 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ASIC3Q9UHC3 531 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 GLI2P10070 1586 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 CEP170BQ9Y4F5 1589 aaPredicted RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 CCNB3Q8WWL7 1395 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 MAPKBP1O60336 1514 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 OR10H3O60404 316 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 RDH16O75452 317 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 CABYRO75952 493 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 NEURL1O76050 574 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 NR3C1P04150 777 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 GPR17Q13304 367 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 GTF2H2Q13888 395 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 DOC2BQ14184 412 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 TXNRD1Q16881 649 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 B3GNTL1Q67FW5 361 aaPredicted RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 GTF2H2CQ6P1K8 395 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 CROCCP2Q86T23 111 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 PEG10Q86TG7 708 aaKnown RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 OR4D5Q8NGN0 318 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 FAM110BQ8TC76 370 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ARSGQ96EG1 525 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 HSFY1Q96LI6 401 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 FAM20AQ96MK3 541 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 RAB11FIP5Q9BXF6 653 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 OR51V1Q9H2C8 321 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 TMBIM4Q9HC24 238 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 SPHK1Q9NYA1 384 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 FRYLO94915 3013 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms