RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 PFN4Q8NHR9 129 aa11.44□□□□□ -0.58
RFC5-201ENST00000392542 DNAJA4Q8WW22 397 aaPredicted RBP11.44□□□□□ -0.58
RFC5-201ENST00000392542 TMEM239Q8WW34 195 aa11.44□□□□□ -0.58
RFC5-201ENST00000392542 RSC1A1Q92681 617 aa11.44□□□□□ -0.58
RFC5-201ENST00000392542 SLC35B4Q969S0 331 aa11.44□□□□□ -0.58
RFC5-201ENST00000392542 OTULINQ96BN8 352 aa11.44□□□□□ -0.58
RFC5-201ENST00000392542 HS6ST2Q96MM7 605 aa11.44□□□□□ -0.58
RFC5-201ENST00000392542 CD180Q99467 661 aa11.44□□□□□ -0.58
RFC5-201ENST00000392542 STACQ99469 402 aa11.44□□□□□ -0.58
RFC5-201ENST00000392542 ATF6BQ99941 703 aa11.44□□□□□ -0.58
RFC5-201ENST00000392542 HDHD5Q9BXW7 423 aa11.44□□□□□ -0.58
RFC5-201ENST00000392542 C11orf54Q9H0W9 315 aaPredicted RBP11.44□□□□□ -0.58
RFC5-201ENST00000392542 DUSP22Q9NRW4 184 aa11.44□□□□□ -0.58
RFC5-201ENST00000392542 SIDT1Q9NXL6 827 aaKnown RBP11.44□□□□□ -0.58
RFC5-201ENST00000392542 SPACA6W5XKT8 324 aa11.44□□□□□ -0.58
RFC5-201ENST00000392542 EPOPA6NHQ4 379 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 H0YGG7 62 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 RFXAPO00287 272 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 FGF17O60258 216 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 PLOD3O60568 738 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 LDB3O75112 727 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 ATP1B1P05026 303 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 GKN3PP0CG01 181 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 IFI30P13284 250 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 MAKP20794 623 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 NT5EP21589 574 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 HNRNPA2B1P22626 353 aaKnown RBP11.43□□□□□ -0.58
RFC5-201ENST00000392542 ARF3P61204 181 aaPredicted RBP11.43□□□□□ -0.58
RFC5-201ENST00000392542 BDH1Q02338 343 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 EOGTQ5NDL2 527 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 ATAD3CQ5T2N8 411 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 NIPAL3Q6P499 406 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 PLBD1Q6P4A8 553 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 ZCCHC12Q6PEW1 402 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 PRSS41Q7RTY9 318 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 KLBQ86Z14 1044 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 TRIM48Q8IWZ4 208 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 TMEFF1Q8IYR6 380 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 TMEM52Q8NDY8 209 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 NEIL3Q8TAT5 605 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 RERGQ96A58 199 aaPredicted RBP11.43□□□□□ -0.58
RFC5-201ENST00000392542 SOSTQ9BQB4 213 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 MMP28Q9H239 520 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 IL21RQ9HBE5 538 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 FBXO34Q9NWN3 711 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 KCNE5Q9UJ90 142 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 NPIPA5A0A0B4J1W7 369 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 SHISA3A0PJX4 238 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 MEIOCA2RUB1 952 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 CDHR4A6H8M9 788 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 NPIPA7E9PJI5 369 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 PEX12O00623 359 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 BHLHE40O14503 412 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 FMO6PO60774 539 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 TRAPPC2P0DI81 140 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 TRAPPC2BP0DI82 140 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 NPIPA8P0DM63 369 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 PAICSP22234 425 aaKnown RBP11.43□□□□□ -0.58
RFC5-201ENST00000392542 GALP22466 123 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 SRP54P61011 504 aaKnown RBP11.43□□□□□ -0.58
RFC5-201ENST00000392542 FZD5Q13467 585 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 ALG11Q2TAA5 492 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 SLC35F1Q5T1Q4 408 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 CNIH2Q6PI25 160 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 METAP1DQ6UB28 335 aaPredicted RBP11.43□□□□□ -0.58
RFC5-201ENST00000392542 MEPCEQ7L2J0 689 aaKnown RBP11.43□□□□□ -0.58
RFC5-201ENST00000392542 RDH10Q8IZV5 341 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 FAM3CQ92520 227 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 PHOX2BQ99453 314 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 C20orf141Q9NUB4 165 aa11.43□□□□□ -0.58
RFC5-201ENST00000392542 ARHGEF17Q96PE2 2063 aaPredicted RBP11.42□□□□□ -0.58
RFC5-201ENST00000392542 REV3LO60673 3130 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 LRP4O75096 1905 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 CCDC182A6NF36 153 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 CD8B2A6NJW9 211 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 C12orf71A8MTZ7 269 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 HCN1O60741 890 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 HPGDSO60760 199 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 GPR75O95800 540 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 AK1P00568 194 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 CD8BP10966 210 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 BMP7P18075 431 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 FUT1P19526 365 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 SSTR4P31391 388 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 CTHP32929 405 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 ACSL1P33121 698 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 HYAL1Q12794 435 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 PRICKLE4Q2TBC4 344 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 LSRQ86X29 649 aaPredicted RBP11.42□□□□□ -0.58
RFC5-201ENST00000392542 SHISA5Q8N114 240 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 VWA5B2Q8N398 1253 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 ACBD7Q8N6N7 88 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 CAPSLQ8WWF8 208 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 DEPDC7Q96QD5 511 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 MED20Q9H944 212 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 ATP13A2Q9NQ11 1180 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 EVA1BQ9NVM1 165 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 CLDND1Q9NY35 253 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 MAT2BQ9NZL9 334 aa11.42□□□□□ -0.58
RFC5-201ENST00000392542 F5P12259 2224 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms