RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 MGLLQ99685 303 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 SPTBP11277 2137 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 SLC22A23A1A5C7 686 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 RGS11O94810 467 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 TPPPO94811 219 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 GPR50Q13585 617 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 C22orf42Q6IC83 251 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 OR4M1Q8NGD0 313 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 ST6GALNAC4Q9H4F1 302 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 SACM1LQ9NTJ5 587 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 POT1Q9NUX5 634 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 GRXCR1A8MXD5 290 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 ITM2AO43736 263 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 SNCAP37840 140 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 GRB2P62993 217 aaKnown RBP13.97□□□□□ -0.17
CCDC50-201ENST00000392455 SPATC1Q76KD6 591 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 BRIX1Q8TDN6 353 aaKnown RBP13.97□□□□□ -0.17
CCDC50-201ENST00000392455 BIRC7Q96CA5 298 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 TMEM98Q9Y2Y6 226 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 A6NCN8 305 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 TO15178 435 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 SRPX2O60687 465 aaPredicted RBP13.97□□□□□ -0.17
CCDC50-201ENST00000392455 EIF2DP41214 584 aaKnown RBP13.97□□□□□ -0.17
CCDC50-201ENST00000392455 SOX2P48431 317 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 OR52E8Q6IFG1 317 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 OR2T27Q8NH04 317 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 UGT2A1Q9Y4X1 527 aa13.97□□□□□ -0.17
CCDC50-201ENST00000392455 RPS10-NUDT3A0A1W2PQS6 291 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 H7BYZ3 331 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 MANBAO00462 879 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 GALTP07902 379 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 GGT1P19440 569 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 RPS10P46783 165 aaKnown RBP13.96□□□□□ -0.17
CCDC50-201ENST00000392455 POU3F4P49335 361 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 OR4F3Q6IEY1 312 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 ADGRG3Q86Y34 549 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 RADILQ96JH8 1075 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 EBF4Q9BQW3 602 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 SEMA4CQ9C0C4 833 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 PPP1R2P9O14990 202 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 IL17RDQ8NFM7 739 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 OR2M2Q96R28 347 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 CLSTN3Q9BQT9 956 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 SIX3O95343 332 aaPredicted RBP13.96□□□□□ -0.17
CCDC50-201ENST00000392455 TAGLN2P37802 199 aaKnown RBP13.96□□□□□ -0.17
CCDC50-201ENST00000392455 CDONQ4KMG0 1287 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 METAP1DQ6UB28 335 aaPredicted RBP13.96□□□□□ -0.17
CCDC50-201ENST00000392455 ZNF705AQ6ZN79 300 aaPredicted RBP13.96□□□□□ -0.17
CCDC50-201ENST00000392455 KLHDC8BQ8IXV7 354 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 OR11L1Q8NGX0 322 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 EBF2Q9HAK2 575 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 TMEM181Q9P2C4 612 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 SALL4Q9UJQ4 1053 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 ZNF223Q9UK11 482 aaPredicted RBP13.96□□□□□ -0.17
CCDC50-201ENST00000392455 RNF150Q9ULK6 438 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 C11orf98E9PRG8 122 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 J3KR12 359 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 C8orf89P0DMQ9 161 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 ARSBP15848 533 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 TAP2Q03519 686 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 FGFBP1Q14512 234 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 SLC6A19Q695T7 634 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 NCBP2-AS2Q69YL0 99 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 OR4D6Q8NGJ1 314 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 APH1AQ96BI3 265 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 ZNF251Q9BRH9 671 aa13.96□□□□□ -0.17
CCDC50-201ENST00000392455 CDK4P11802 303 aa13.96□□□□□ -0.18
CCDC50-201ENST00000392455 PYCR1P32322 319 aa13.96□□□□□ -0.18
CCDC50-201ENST00000392455 FLI1Q01543 452 aaPredicted RBP13.96□□□□□ -0.18
CCDC50-201ENST00000392455 TCTE1Q5JU00 501 aa13.96□□□□□ -0.18
CCDC50-201ENST00000392455 LRRC28Q86X40 367 aaPredicted RBP13.96□□□□□ -0.18
CCDC50-201ENST00000392455 NUP43Q8NFH3 380 aa13.96□□□□□ -0.18
CCDC50-201ENST00000392455 INSL6Q9Y581 213 aa13.96□□□□□ -0.18
CCDC50-201ENST00000392455 IGLV3-22A0A075B6J6 115 aa13.96□□□□□ -0.18
CCDC50-201ENST00000392455 DVL2O14641 736 aa13.96□□□□□ -0.18
CCDC50-201ENST00000392455 GBAP04062 536 aa13.96□□□□□ -0.18
CCDC50-201ENST00000392455 S100A8P05109 93 aa13.96□□□□□ -0.18
CCDC50-201ENST00000392455 ANXA7P20073 488 aaKnown RBP13.96□□□□□ -0.18
CCDC50-201ENST00000392455 RAB6AP20340 208 aa13.96□□□□□ -0.18
CCDC50-201ENST00000392455 ADARB1P78563 741 aaKnown RBP13.96□□□□□ -0.18
CCDC50-201ENST00000392455 NLRP8Q86W28 1048 aa13.96□□□□□ -0.18
CCDC50-201ENST00000392455 AIG1Q9NVV5 245 aa13.96□□□□□ -0.18
CCDC50-201ENST00000392455 CACNG2Q9Y698 323 aa13.96□□□□□ -0.18
CCDC50-201ENST00000392455 JUPP14923 745 aa13.95□□□□□ -0.18
CCDC50-201ENST00000392455 HTR1EP28566 365 aa13.95□□□□□ -0.18
CCDC50-201ENST00000392455 EVI2BP34910 448 aa13.95□□□□□ -0.18
CCDC50-201ENST00000392455 MMP12P39900 470 aa13.95□□□□□ -0.18
CCDC50-201ENST00000392455 OR13C9Q8NGT0 318 aa13.95□□□□□ -0.18
CCDC50-201ENST00000392455 ZNF28P17035 718 aa13.95□□□□□ -0.18
CCDC50-201ENST00000392455 CBLP22681 906 aa13.95□□□□□ -0.18
CCDC50-201ENST00000392455 NPAP1Q9NZP6 1156 aa13.95□□□□□ -0.18
CCDC50-201ENST00000392455 YIPF1Q9Y548 306 aa13.95□□□□□ -0.18
CCDC50-201ENST00000392455 DUOX1Q9NRD9 1551 aa13.95□□□□□ -0.18
CCDC50-201ENST00000392455 EIF3FO00303 357 aaPredicted RBP13.95□□□□□ -0.18
CCDC50-201ENST00000392455 TXNL1O43396 289 aa13.95□□□□□ -0.18
CCDC50-201ENST00000392455 SOX14O95416 240 aa13.95□□□□□ -0.18
CCDC50-201ENST00000392455 UNGP13051 313 aaPredicted RBP13.95□□□□□ -0.18
CCDC50-201ENST00000392455 HOXD11P31277 338 aaPredicted RBP13.95□□□□□ -0.18
CCDC50-201ENST00000392455 TXNDC8Q6A555 127 aa13.95□□□□□ -0.18
CCDC50-201ENST00000392455 TIPARPQ7Z3E1 657 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms