RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SYNPO2LQ9H987 977 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 CNIH4Q9P003 139 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 E2F3O00716 465 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF140P52738 457 aaPredicted RBP18.55■□□□□ 0.56
SHANK1-203ENST00000391813 MEF2DQ14814 521 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 PIANPQ8IYJ0 282 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 PRDM9Q9NQV7 894 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 RCE1Q9Y256 329 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF736B4DX44 427 aaPredicted RBP18.55■□□□□ 0.56
SHANK1-203ENST00000391813 SDC3O75056 442 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 FZD7O75084 574 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 NDUFB2O95178 105 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 TCRBP04435 133 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 GKP32189 559 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 CDKN1CP49918 316 aaPredicted RBP18.55■□□□□ 0.56
SHANK1-203ENST00000391813 LUMP51884 338 aaPredicted RBP18.55■□□□□ 0.56
SHANK1-203ENST00000391813 TMEM107Q6UX40 140 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 FAM83HQ6ZRV2 1179 aaPredicted RBP18.55■□□□□ 0.56
SHANK1-203ENST00000391813 SLC16A9Q7RTY1 509 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 DDX31Q9H8H2 851 aaKnown RBP18.55■□□□□ 0.56
SHANK1-203ENST00000391813 HIF3AQ9Y2N7 669 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 PIAS3Q9Y6X2 628 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 V9GY05 133 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 GAPDHSO14556 408 aaPredicted RBP18.55■□□□□ 0.56
SHANK1-203ENST00000391813 TXNL1O43396 289 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 H2BFMP0C1H6 154 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 PEA15Q15121 130 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF440Q8IYI8 595 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 PNPLA1Q8N8W4 532 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF709Q8N972 641 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 GPR148Q8TDV2 347 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 SRA1Q9HD15 236 aaKnown RBP18.55■□□□□ 0.56
SHANK1-203ENST00000391813 SPATA6Q9NWH7 488 aaPredicted RBP18.55■□□□□ 0.56
SHANK1-203ENST00000391813 DIMT1Q9UNQ2 313 aaKnown RBP18.55■□□□□ 0.56
SHANK1-203ENST00000391813 GABRR3A8MPY1 467 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 RNF13O43567 381 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 NTSR1P30989 418 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 GABRA3P34903 492 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 LMAN2Q12907 356 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 ILKQ13418 452 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 Q6ZPB1 254 aaPredicted RBP18.54■□□□□ 0.56
SHANK1-203ENST00000391813 OR4K13Q8NH42 304 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 GALNT9Q9HCQ5 603 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 PLAGL1Q9UM63 463 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 HTR3AP46098 478 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 DUSP3P51452 185 aaPredicted RBP18.54■□□□□ 0.56
SHANK1-203ENST00000391813 MED17Q9NVC6 651 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 TRIM64A6NGJ6 449 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 TRIM64BA6NI03 449 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 GRXCR1A8MXD5 290 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 P2RX6O15547 441 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 GPRIN2O60269 458 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 SLC16A8O95907 504 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 STATHP02808 62 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 ADRA1AP35348 466 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 MTNR1BP49286 362 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 RPS21P63220 83 aaKnown RBP18.54■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF585AQ6P3V2 769 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 Q6ZSR9 355 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 SLC51BQ86UW2 128 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF566Q969W8 418 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 HOXD1Q9GZZ0 328 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 PRODH2Q9UF12 536 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 VEGFDO43915 354 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 ARAFP10398 606 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 DBPQ10586 325 aaPredicted RBP18.54■□□□□ 0.56
SHANK1-203ENST00000391813 RPS26P11Q5JNZ5 115 aaPredicted RBP18.54■□□□□ 0.56
SHANK1-203ENST00000391813 LYPD4Q6UWN0 246 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 NLRP8Q86W28 1048 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 OR8J2Q8NGG1 315 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 ACTRT3Q9BYD9 372 aa18.54■□□□□ 0.56
SHANK1-203ENST00000391813 RTCAO00442 366 aaKnown RBP18.53■□□□□ 0.56
SHANK1-203ENST00000391813 EDIL3O43854 480 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 NKX3-2P78367 333 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 OR4C11Q6IEV9 310 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 TBPL2Q6SJ96 375 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 C12orf40Q86WS4 652 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 FYTTD1Q96QD9 318 aaKnown RBP18.53■□□□□ 0.56
SHANK1-203ENST00000391813 OR5M11Q96RB7 305 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 PRRG4Q9BZD6 226 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 ABI3Q9P2A4 366 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 A0A1B0GTW7 788 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 hCG_1807616A0A1W2PRN6 198 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 SPINT3P49223 89 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 OR2G6Q5TZ20 316 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 TRNP1Q6NT89 227 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 SULT4A1Q9BR01 284 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 IL26Q9NPH9 171 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 FANCFQ9NPI8 374 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 RAB19A4D1S5 217 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 SOX1O00570 391 aaPredicted RBP18.53■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF195O14628 629 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 POLR2CP19387 275 aaPredicted RBP18.53■□□□□ 0.56
SHANK1-203ENST00000391813 S100A11P31949 105 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 ETV3P41162 512 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 PSPHP78330 225 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 RBMS2Q15434 407 aaKnown RBP18.53■□□□□ 0.56
SHANK1-203ENST00000391813 ANKRD33Q7Z3H0 272 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 HMGN2P46Q86SG4 172 aa18.53■□□□□ 0.56
SHANK1-203ENST00000391813 OR10K1Q8NGX5 313 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms