RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 HTR2AP28223 471 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 GSSP48637 474 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 CLK3P49761 638 aaKnown RBP11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 DECR1Q16698 335 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 CCDC92Q53HC0 331 aaPredicted RBP11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 EIPR1Q53HC9 387 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 STPG1Q5TH74 334 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 CDCP2Q5VXM1 449 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 HLA-DQA1Q5Y7H0 255 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 ZNF770Q6IQ21 691 aaPredicted RBP11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 PAPD4Q6PIY7 484 aaKnown RBP11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 PLEKHM3Q6ZWE6 761 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 SLCO6A1Q86UG4 719 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 NLGN4XQ8N0W4 816 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 APCDD1LQ8NCL9 501 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 ZNF555Q8NEP9 628 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 DEFB124Q8NES8 71 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 NFAM1Q8NET5 270 aaPredicted RBP11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 DIO2Q92813 273 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 ART5Q96L15 291 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 FUZQ9BT04 418 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 WWTR1Q9GZV5 400 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 CFL2Q9Y281 166 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 A0A1W2PRQ8 180 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 FRG2CA6NGY1 282 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 SAGE2PA6NJ88 616 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 NPIPB9F8W1W9 429 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 CYP7B1O75881 506 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 JMJD7P0C870 316 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 CDK4P11802 303 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 ANXA8P13928 327 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 DRD5P21918 477 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 CBLP22681 906 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 ELK4P28324 431 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 ATP12AP54707 1039 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 ILKQ13418 452 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 DGCR6Q14129 220 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 RFX4Q33E94 735 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 HES3Q5TGS1 186 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 SLC29A4Q7RTT9 530 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 CPEB2Q7Z5Q1 589 aaKnown RBP11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 NKAIN4Q8IVV8 208 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 GATSQ8NAP1 163 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 FNDC8Q8TC99 324 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 FKBP10Q96AY3 582 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 ADOQ96SZ5 270 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 RHBDL2Q9NX52 303 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 AASSQ9UDR5 926 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 PTRH2Q9Y3E5 179 aaKnown RBP11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 PCNX3Q9H6A9 2034 aa11.24□□□□□ -0.61
SPTBN1-203ENST00000389980 ASPMQ8IZT6 3477 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 SH3PXD2BA1X283 911 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 H3BSA7 217 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 BCKDKO14874 412 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 KLF7O75840 302 aaPredicted RBP11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 TPD52P55327 224 aaPredicted RBP11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 EPS8Q12929 822 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 NPRL3Q12980 569 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 RAPSNQ13702 412 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 TTC23Q5W5X9 447 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 PIP4P1Q86T03 277 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 MARCH9Q86YJ5 346 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 B3GNT7Q8NFL0 401 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 ITPKCQ96DU7 683 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 LRFN5Q96NI6 719 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 RBM38Q9H0Z9 239 aaKnown RBP11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 PCDHGA10Q9Y5H3 936 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 GVINP1Q7Z2Y8 2422 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 FAAHO00519 579 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 ABCB7O75027 752 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 REM1O75628 298 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 IL33O95760 270 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 UMODP07911 640 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 ITGAMP11215 1152 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 NR1H2P55055 460 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 SMIM11AP58511 58 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 RNF4P78317 190 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 FGFBP1Q14512 234 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 NCF4Q15080 339 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 ZNF141Q15928 474 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 C3orf38Q5JPI3 329 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 PGBD2Q6P3X8 592 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 KLHL17Q6TDP4 642 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 TMEM205Q6UW68 189 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 APOOLQ6UXV4 268 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 ZNF517Q6ZMY9 492 aaPredicted RBP11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 TIPARPQ7Z3E1 657 aaKnown RBP11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 GDF7Q7Z4P5 450 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 ERI1Q8IV48 349 aaKnown RBP11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 C7orf57Q8NEG2 295 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 OR4K5Q8NGD3 323 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 PMM1Q92871 262 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 SLC41A3Q96GZ6 507 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 TAAR9Q96RI9 348 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 LPAR4Q99677 370 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 WDR54Q9H977 334 aa11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 DNAJB12Q9NXW2 375 aaKnown RBP11.23□□□□□ -0.61
SPTBN1-203ENST00000389980 SLC7A7Q9UM01 511 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms