RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 CXCL5P42830 114 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 CSE1LP55060 971 aaKnown RBP-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 LIM2P55344 173 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 MC1RQ01726 317 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 CNTN2Q02246 1040 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 PPP2R5CQ13362 524 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 ARFRP1Q13795 201 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 ZNF235Q14590 738 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 EXOSC7Q15024 291 aaKnown RBP-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 MEA1Q16626 185 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 SNRNP48Q6IEG0 339 aaKnown RBP-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 TMEM25Q86YD3 366 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 PNKDQ8N490 385 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 COLGALT1Q8NBJ5 622 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 SETD6Q8TBK2 473 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 ATP6V0A1Q93050 837 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 DNAJA3Q96EY1 480 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 CPXM1Q96SM3 734 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 AGPAT1Q99943 283 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 SULT4A1Q9BR01 284 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 SHANK2-AS3Q9BTD1 123 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 UNC45AQ9H3U1 944 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 PNPLA3Q9NST1 481 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 ELOVL2Q9NXB9 296 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 LUZP4Q9P127 313 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 ANAPC2Q9UJX6 822 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 ZNF215Q9UL58 517 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 TRAPPC4Q9Y296 219 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 CSMD3Q7Z407 3707 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 DYNC1H1Q14204 4646 aaKnown RBP-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 ZFHX3Q15911 3703 aa-0.65□□□□□ -2.51
RNU6-880P-201ENST00000384526 LRBAP50851 2863 aa-0.66□□□□□ -2.51
RNU6-880P-201ENST00000384526 NBPF19A0A087WUL8 3843 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 TCRBV21S2A2A0A5A6 115 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 C19orf81C9J6K1 198 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 TLR4O00206 839 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 SLC28A1O00337 649 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 SYT7O43581 403 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 FCGR3BO75015 233 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 PEX14O75381 377 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 TADA2AO75478 443 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 ABCB1P08183 1280 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 ANKRD34CP0C6C1 535 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 ALOX12P18054 663 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 LBPP18428 481 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 COX7A1P24310 79 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 PSMB4P28070 264 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 RPL29P47914 159 aaKnown RBP-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 RPS11P62280 158 aaKnown RBP eCLIP-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 RBM3P98179 157 aaKnown RBP-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 MZT1Q08AG7 82 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 CDC20Q12834 499 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 SMC1AQ14683 1233 aaKnown RBP-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 SPHARQ15513 63 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 ATRAIDQ6UW56 229 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 UNQ9370/PRO34162Q6UXP9 181 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 CAMK2N1Q7Z7J9 78 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 VSIG1Q86XK7 387 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 CREBRFQ8IUR6 639 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 ZNF444Q8N0Y2 327 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 C15orf56Q8N910 161 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 OR2L3Q8NG85 312 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 OR8H1Q8NGG4 311 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 SELENOMQ8WWX9 145 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 RAD54LQ92698 747 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 PRCCQ92733 491 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 EXT2Q93063 718 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 SECISBP2LQ93073 1101 aaKnown RBP-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 S1PR3Q99500 378 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 ZNF717Q9BY31 904 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 POLR2J2Q9GZM3 115 aaKnown RBP-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 MAGT1Q9H0U3 335 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 POLR2J3Q9H1A7 115 aaKnown RBP-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 ZNF355PQ9NSJ1 428 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 OLA1Q9NTK5 396 aaKnown RBP-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 EHFQ9NZC4 300 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 DEC1Q9P2X7 70 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 OR12D3Q9UGF7 316 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 TUBGCP4Q9UGJ1 667 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 DCDC2Q9UHG0 476 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 TPRP12270 2363 aaKnown RBP-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 ADGRG4Q8IZF6 3080 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 NEURL4Q96JN8 1562 aa-0.66□□□□□ -2.52
RNU6-880P-201ENST00000384526 RPAP1Q9BWH6 1393 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 A0A087X0M5 115 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 NPIPA5A0A0B4J1W7 369 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 TRBV7-9A0A0J9YWB2 115 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 A0A1B0GX30 115 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 NPIPA5E9PKD4 350 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 M0R296 226 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 CD5LO43866 347 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 CD55P08174 381 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 MBL2P11226 248 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 GCKP35557 465 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 TNFSF9P41273 254 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 KIR2DS2P43631 304 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 RHBDL3P58872 404 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 CSNK1G2P78368 415 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 PITPNAQ00169 270 aa-0.67□□□□□ -2.52
RNU6-880P-201ENST00000384526 SPIBQ01892 262 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms