RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 HPCAL1P37235 193 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 PRIM2P49643 509 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 EEF1A1P68104 462 aaKnown RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 PTGR1Q14914 329 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 GUSBP1Q15486 140 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 PLPPR5Q32ZL2 321 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 GLYR1Q49A26 553 aaPredicted RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 EEF1A1P5Q5VTE0 462 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 CXorf67Q86X51 503 aaPredicted RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 CNPY4Q8N129 248 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 KRTCAP2Q8N6L1 136 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 FAM110BQ8TC76 370 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 TRIM44Q96DX7 344 aaPredicted RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 ACSS1Q9NUB1 689 aaPredicted RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 ZCCHC3Q9NUD5 404 aaKnown RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 MKS1Q9NXB0 559 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 A0A0J9YW62 118 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 C16orf97H3BN30 126 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 LINC01387J3KSC0 135 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 NPHS1O60500 1241 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 PLGP00747 810 aaPredicted RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 HPGDP15428 266 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 HOXB4P17483 251 aaPredicted RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 CRYGSP22914 178 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 HOXC12P31275 282 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 SFTPDP35247 375 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 ASMTP46597 345 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 ZNF41P51814 821 aaPredicted RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 VSNL1P62760 191 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 POU6F2P78424 691 aaPredicted RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 TP53BP2Q13625 1128 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.69□□□□□ -0.38
SHOX-202ENST00000381575 CTU2Q2VPK5 515 aaKnown RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 NDUFAF6Q330K2 333 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 RNF165Q6ZSG1 346 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 FAM214BQ7L5A3 538 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 GTPBP8Q8N3Z3 284 aaPredicted RBP12.69□□□□□ -0.38
SHOX-202ENST00000381575 OR6Y1Q8NGX8 325 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 POC1BQ8TC44 478 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 TCP10LQ8TDR4 215 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 ADGRG7Q96K78 797 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 SLC39A3Q9BRY0 314 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 CXorf36Q9H7Y0 433 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 ATP6V1HQ9UI12 483 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 TMED5Q9Y3A6 229 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 KCNE3Q9Y6H6 103 aa12.69□□□□□ -0.38
SHOX-202ENST00000381575 SCDO00767 359 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 C6orf47O95873 294 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 NGFRP08138 427 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 CD8BP10966 210 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 FCGR2AP12318 317 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 ZNF17P17021 662 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 PSMA4P25789 261 aaKnown RBP12.68□□□□□ -0.38
SHOX-202ENST00000381575 NKX6-1P78426 367 aaPredicted RBP12.68□□□□□ -0.38
SHOX-202ENST00000381575 ZNF117Q03924 483 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 IFFO1Q0D2I5 559 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 FOXF1Q12946 379 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 XKR7Q5GH72 579 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 EXOSC6Q5RKV6 272 aaKnown RBP12.68□□□□□ -0.38
SHOX-202ENST00000381575 R3HCC1LQ7Z5L2 792 aaKnown RBP12.68□□□□□ -0.38
SHOX-202ENST00000381575 WDR75Q8IWA0 830 aaKnown RBP12.68□□□□□ -0.38
SHOX-202ENST00000381575 OR5AK3PQ8NH89 298 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 PHOSPHO1Q8TCT1 267 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 ZBTB9Q96C00 473 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 MTERF3Q96E29 417 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 ARSGQ96EG1 525 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 MARK4Q96L34 752 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 BTBD2Q9BX70 525 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 C12orf49Q9H741 205 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 L2HGDHQ9H9P8 463 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 UBQLN4Q9NRR5 601 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 BEX4Q9NWD9 120 aaPredicted RBP12.68□□□□□ -0.38
SHOX-202ENST00000381575 ELOVL5Q9NYP7 299 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 ZNF226Q9NYT6 803 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 ZDHHC2Q9UIJ5 367 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 EMC9Q9Y3B6 208 aa12.68□□□□□ -0.38
SHOX-202ENST00000381575 A0A087WZY1 265 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 TMEM114B3SHH9 223 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 LYPLA1O75608 230 aaPredicted RBP12.67□□□□□ -0.38
SHOX-202ENST00000381575 SYNGR4O95473 234 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 NTN1O95631 604 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 THBDP07204 575 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 FGF4P08620 206 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 LOXP28300 417 aaPredicted RBP12.67□□□□□ -0.38
SHOX-202ENST00000381575 CTBP2P56545 445 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 RPS26P62854 115 aaKnown RBP12.67□□□□□ -0.38
SHOX-202ENST00000381575 SPDYE7PQ495Y7 208 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 ATP6AP1LQ52LC2 224 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 Q5PR19 223 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 CPTPQ5TA50 214 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 IL23RQ5VWK5 629 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 HBMQ6B0K9 141 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 ALKBH2Q6NS38 261 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 CDC73Q6P1J9 531 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 CBLN3Q6UW01 205 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 LRIG3Q6UXM1 1119 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 OLIG3Q7RTU3 272 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 ZNF614Q8N883 585 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 FNDC5Q8NAU1 212 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 OR2V1Q8NHB1 315 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms