RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 ZNF474Q6S9Z5 364 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 PLXDC2Q6UX71 529 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 APOOLQ6UXV4 268 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ESPNLQ6ZVH7 1005 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 TRABD2AQ86V40 505 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ZNF527Q8NB42 609 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 SLC16A11Q8NCK7 471 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 OR6K3Q8NGY3 331 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 OR5P2Q8WZ92 322 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 MOAP1Q96BY2 351 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 GIMAP5Q96F15 307 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 GMPPAQ96IJ6 420 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 BTBD2Q9BX70 525 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 HOXD1Q9GZZ0 328 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 C12orf65Q9H3J6 166 aaKnown RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 TUBB1Q9H4B7 451 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ZCCHC3Q9NUD5 404 aaKnown RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 PTGDR2Q9Y5Y4 395 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 A0A1W2PRB8 838 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 EIF1AYO14602 144 aaKnown RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 PIP5K1BO14986 540 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 SCAMP2O15127 329 aaKnown RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ADAMDEC1O15204 470 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 SYNGR4O95473 234 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 PLGP00747 810 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 CGAP01215 116 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ACP2P11117 423 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 CD53P19397 219 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 IL11P20809 199 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ADH6P28332 368 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ALDH3A1P30838 453 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 HOXC12P31275 282 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 EIF1AXP47813 144 aaKnown RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 CTBP2P56545 445 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 SIRPAP78324 504 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 POU6F2P78424 691 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 MAD2L1Q13257 205 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 POU4F3Q15319 338 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 GUSBP1Q15486 140 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 DUSP5Q16690 384 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 EXOSC6Q5RKV6 272 aaKnown RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 GGNQ86UU5 652 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 STK32CQ86UX6 486 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 EXOC3L1Q86VI1 746 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 LRRC75A-AS1Q8N1F1 130 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 OR56A1Q8NGH5 318 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 OR5M1Q8NGP8 315 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 OR4C3Q8NH37 302 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 PSMA8Q8TAA3 256 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 JADE3Q92613 823 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 FAM120BQ96EK7 910 aaKnown RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 WFIKKN1Q96NZ8 548 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 OPN3Q9H1Y3 402 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 PIGUQ9H490 435 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 TIGARQ9NQ88 270 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 DLL4Q9NR61 685 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 BAIAP2L1Q9UHR4 511 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 LGALS13Q9UHV8 139 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 FAF1Q9UNN5 650 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 VDAC3Q9Y277 283 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 V9GYY5 206 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ARID1AO14497 2285 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 FLNAP21333 2647 aaKnown RBP11.66□□□□□ -0.54
RPAIN-202ENST00000381208 GJE1A6NN92 205 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 H0YC42 278 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 CHRNGP07510 517 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 PRPS1L1P21108 318 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 ELK4P28324 431 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 TPD52P55327 224 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-202ENST00000381208 SUMO3P55854 103 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-202ENST00000381208 LASP1Q14847 261 aaKnown RBP11.66□□□□□ -0.54
RPAIN-202ENST00000381208 PLPPR5Q32ZL2 321 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 UGT3A2Q3SY77 523 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 XKR7Q5GH72 579 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 CDC73Q6P1J9 531 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 FIGNL1Q6PIW4 674 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 C20orf204Q6ZNR8 217 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 BIVMQ86UB2 503 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 KIRREL3Q8IZU9 778 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 OR10D3Q8NH80 312 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 OR2V1Q8NHB1 315 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 CLHC1Q8NHS4 586 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 B4GALNT2Q8NHY0 566 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 ADAMTS15Q8TE58 950 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 CHMP6Q96FZ7 201 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 ZIM3Q96PE6 472 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 ACTRT3Q9BYD9 372 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 OR10A4Q9H209 315 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 ANKZF1Q9H8Y5 726 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 PLSCR4Q9NRQ2 329 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 MED17Q9NVC6 651 aa11.66□□□□□ -0.54
RPAIN-202ENST00000381208 ARGLU1Q9NWB6 273 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-202ENST00000381208 ZNF469Q96JG9 3925 aaPredicted RBP11.65□□□□□ -0.54
RPAIN-202ENST00000381208 FAM171A2A8MVW0 826 aa11.65□□□□□ -0.55
RPAIN-202ENST00000381208 SS18L1O75177 396 aaPredicted RBP11.65□□□□□ -0.55
RPAIN-202ENST00000381208 SNUPNO95149 360 aaKnown RBP11.65□□□□□ -0.55
RPAIN-202ENST00000381208 HMGN2P05204 90 aaKnown RBP11.65□□□□□ -0.55
RPAIN-202ENST00000381208 TUBBP07437 444 aa11.65□□□□□ -0.55
RPAIN-202ENST00000381208 CCT3P49368 545 aaKnown RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 763.1 ms