RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 ZNF517Q6ZMY9 492 aaPredicted RBP18.63■□□□□ 0.57
EBF1-202ENST00000380654 ABHD13Q7L211 337 aa18.63■□□□□ 0.57
EBF1-202ENST00000380654 CXXC5Q7LFL8 322 aaKnown RBP18.63■□□□□ 0.57
EBF1-202ENST00000380654 KLBQ86Z14 1044 aa18.63■□□□□ 0.57
EBF1-202ENST00000380654 TRIM48Q8IWZ4 208 aa18.63■□□□□ 0.57
EBF1-202ENST00000380654 SAMD14Q8IZD0 417 aaPredicted RBP18.63■□□□□ 0.57
EBF1-202ENST00000380654 ZNF619Q8N2I2 560 aa18.63■□□□□ 0.57
EBF1-202ENST00000380654 ART5Q96L15 291 aa18.63■□□□□ 0.57
EBF1-202ENST00000380654 ZFYVE21Q9BQ24 234 aa18.63■□□□□ 0.57
EBF1-202ENST00000380654 HCAR1Q9BXC0 346 aa18.63■□□□□ 0.57
EBF1-202ENST00000380654 TEX12Q9BXU0 123 aa18.63■□□□□ 0.57
EBF1-202ENST00000380654 CAPN10Q9HC96 672 aa18.63■□□□□ 0.57
EBF1-202ENST00000380654 C2orf92A0A1B0GVN3 265 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 SYNDIG1LA6NDD5 238 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 IGHA1P01876 353 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 OR1Q1Q15612 314 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 RSBN1Q5VWQ0 802 aaPredicted RBP18.62■□□□□ 0.57
EBF1-202ENST00000380654 RANBP3LQ86VV4 465 aaPredicted RBP18.62■□□□□ 0.57
EBF1-202ENST00000380654 ZNF761Q86XN6 746 aaPredicted RBP18.62■□□□□ 0.57
EBF1-202ENST00000380654 MARCH9Q86YJ5 346 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 KLHL36Q8N4N3 616 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 COX18Q8N8Q8 333 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 CAMKVQ8NCB2 501 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 CHAC2Q8WUX2 184 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 TBX5Q99593 518 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 TCEAL2Q9H3H9 227 aaPredicted RBP18.62■□□□□ 0.57
EBF1-202ENST00000380654 MED17Q9NVC6 651 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 H2AFY2Q9P0M6 372 aaPredicted RBP18.62■□□□□ 0.57
EBF1-202ENST00000380654 TNFRSF10DQ9UBN6 386 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 MALT1Q9UDY8 824 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.62■□□□□ 0.57
EBF1-202ENST00000380654 TRDV1A0A1B0GX56 115 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 TRAPPC13A5PLN9 417 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 URADA6NGE7 173 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 GABRPO00591 440 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 HCRTR1O43613 425 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 STX11O75558 287 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 APBB3O95704 486 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 HNRNPA2B1P22626 353 aaKnown RBP18.62■□□□□ 0.57
EBF1-202ENST00000380654 PYDC2Q56P42 97 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 XKRXQ6PP77 449 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 TMEM92Q6UXU6 159 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 ZAR1Q86SH2 424 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 ATP6V1C2Q8NEY4 427 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 FANK1Q8TC84 345 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 SIDT1Q9NXL6 827 aaKnown RBP18.62■□□□□ 0.57
EBF1-202ENST00000380654 ZNF223Q9UK11 482 aaPredicted RBP18.62■□□□□ 0.57
EBF1-202ENST00000380654 SPEGQ15772 3267 aa18.62■□□□□ 0.57
EBF1-202ENST00000380654 GXYLT2A0PJZ3 443 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 UNC119BA6NIH7 251 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 THBS1P07996 1170 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 IFI30P13284 250 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 RFX3P48380 749 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 PLAURQ03405 335 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 SCN1BQ07699 218 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 EIPR1Q53HC9 387 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 ZNF542PQ5EBM4 170 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 PDZK1Q5T2W1 519 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 ZC3H14Q6PJT7 736 aaKnown RBP18.61■□□□□ 0.57
EBF1-202ENST00000380654 TMEM184AQ6ZMB5 413 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 GALNT6Q8NCL4 622 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 ASB12Q8WXK4 309 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 LMAN2LQ9H0V9 348 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 C11orf54Q9H0W9 315 aaPredicted RBP18.61■□□□□ 0.57
EBF1-202ENST00000380654 A8MV72 311 aaPredicted RBP18.61■□□□□ 0.57
EBF1-202ENST00000380654 POLR1CO15160 346 aaPredicted RBP18.61■□□□□ 0.57
EBF1-202ENST00000380654 AKAP8O43823 692 aaKnown RBP18.61■□□□□ 0.57
EBF1-202ENST00000380654 HPGDSO60760 199 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 LYPD3O95274 346 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 NID1P14543 1247 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 RPS4Y1P22090 263 aaKnown RBP18.61■□□□□ 0.57
EBF1-202ENST00000380654 RCVRNP35243 200 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 COPZ1P61923 177 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 SRSF5Q13243 272 aaKnown RBP18.61■□□□□ 0.57
EBF1-202ENST00000380654 FCRLBQ6BAA4 426 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 ZNF322Q6U7Q0 402 aaPredicted RBP18.61■□□□□ 0.57
EBF1-202ENST00000380654 THSD4Q6ZMP0 1018 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 OR6F1Q8NGZ6 308 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 NEIL3Q8TAT5 605 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 TMEM239Q8WW34 195 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 RERGQ96A58 199 aaPredicted RBP18.61■□□□□ 0.57
EBF1-202ENST00000380654 TWSG1Q9GZX9 223 aa18.61■□□□□ 0.57
EBF1-202ENST00000380654 TDRD6O60522 2096 aaKnown RBP18.6■□□□□ 0.57
EBF1-202ENST00000380654 CDHR4A6H8M9 788 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 CYR61O00622 381 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 ATP1B1P05026 303 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 HMGN1P05114 100 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 CTSBP07858 339 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 CELA2BP08218 269 aaPredicted RBP18.6■□□□□ 0.57
EBF1-202ENST00000380654 GSTT2P0CG29 244 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 GSTT2BP0CG30 244 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 TBXA2RP21731 343 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 APEX1P27695 318 aaKnown RBP18.6■□□□□ 0.57
EBF1-202ENST00000380654 TPMTP51580 245 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 SF3B4Q15427 424 aaKnown RBP eCLIP18.6■□□□□ 0.57
EBF1-202ENST00000380654 PRICKLE4Q2TBC4 344 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 EOGTQ5NDL2 527 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 DGAT2L6Q6ZPD8 337 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 ZNF438Q7Z4V0 828 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 ABI3BPQ7Z7G0 1075 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms