RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SLC43A2Q8N370 569 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 DNASE2BQ8WZ79 361 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 CLDN23Q96B33 292 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 HSPA12BQ96MM6 686 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 FOXQ1Q9C009 403 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 TRIM2Q9C040 744 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 Q9N2J8 555 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 FBXO34Q9NWN3 711 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 SOHLH2Q9NX45 425 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 CORINQ9Y5Q5 1042 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 TMEM129A0AVI4 362 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 SURF4O15260 269 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 LYPD3O95274 346 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 HTR2AP28223 471 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 FUT7Q11130 342 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 ZNF141Q15928 474 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 ANKDD1AQ495B1 522 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 IGFN1Q86VF2 1251 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 TGM7Q96PF1 710 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 CFL2Q9Y281 166 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 CSNK1G3Q9Y6M4 447 aa21.41■■□□□ 1.02
VPS16-201ENST00000380443 LOC100506127A0A0U1RQW1 187 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 PIAS2O75928 621 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 RCBTB2O95199 551 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 PDGFBP01127 241 aaPredicted RBP21.4■■□□□ 1.02
VPS16-201ENST00000380443 PSMA1P25786 263 aaKnown RBP21.4■■□□□ 1.02
VPS16-201ENST00000380443 GRK5P34947 590 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 SOX6P35712 828 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 RBM34P42696 430 aaKnown RBP21.4■■□□□ 1.02
VPS16-201ENST00000380443 MTNR1AP48039 350 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 CTBP2P56545 445 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 AMZ1Q400G9 498 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 TMPRSS11FQ6ZWK6 438 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 ZNF550Q7Z398 422 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 MFSD4AQ8N468 514 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 DOK4Q8TEW6 326 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 CHPT1Q8WUD6 406 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 RNFT2Q96EX2 444 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 MVB12AQ96EY5 273 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 MMABQ96EY8 250 aaPredicted RBP21.4■■□□□ 1.02
VPS16-201ENST00000380443 CHCHD6Q9BRQ6 235 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 HHATLQ9HCP6 504 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 IRAK4Q9NWZ3 460 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 PRODH2Q9UF12 536 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 CLEC2DQ9UHP7 191 aa21.4■■□□□ 1.02
VPS16-201ENST00000380443 J3QRK9 145 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 TAF4O00268 1085 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 MED26O95402 600 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 PRG2P13727 222 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 IDUAP35475 653 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 GPR3P46089 330 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 GPR4P46093 362 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 GAS1P54826 345 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 SSX1Q16384 188 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 AADACL4Q5VUY2 407 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 ZBTB46Q86UZ6 589 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 OR7G1Q8NGA0 311 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 OR52L1Q8NGH7 329 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 FN3KQ9H479 309 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 MED31Q9Y3C7 131 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 SIT1Q9Y3P8 196 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 MMACHCQ9Y4U1 282 aa21.39■■□□□ 1.02
VPS16-201ENST00000380443 IGHV5-51A0A0C4DH38 117 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 CHP2O43745 196 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 CBFA2T3O75081 653 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 GKN3PP0CG01 181 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 CD40LGP29965 261 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 PPM1FP49593 454 aaPredicted RBP21.39■■□□□ 1.01
VPS16-201ENST00000380443 TMED1Q13445 227 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 RGS21Q2M5E4 152 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 DEFB133Q30KQ1 61 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 WDR45BQ5MNZ6 344 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 BCDIN3DQ7Z5W3 292 aaKnown RBP21.39■■□□□ 1.01
VPS16-201ENST00000380443 SHISA5Q8N114 240 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 OR4Q3Q8NH05 313 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 OR51Q1Q8NH59 317 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 ERVMER34-1Q9H9K5 563 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 NDUFB11Q9NX14 153 aa21.39■■□□□ 1.01
VPS16-201ENST00000380443 PIP5K1CO60331 668 aa21.38■■□□□ 1.01
VPS16-201ENST00000380443 BMP7P18075 431 aa21.38■■□□□ 1.01
VPS16-201ENST00000380443 ZNF267Q14586 743 aaPredicted RBP21.38■■□□□ 1.01
VPS16-201ENST00000380443 INAQ16352 499 aa21.38■■□□□ 1.01
VPS16-201ENST00000380443 NXNL2Q5VZ03 156 aa21.38■■□□□ 1.01
VPS16-201ENST00000380443 LSMEM1Q8N8F7 131 aa21.38■■□□□ 1.01
VPS16-201ENST00000380443 MINDY2Q8NBR6 621 aa21.38■■□□□ 1.01
VPS16-201ENST00000380443 AHCYL2Q96HN2 611 aaKnown RBP21.38■■□□□ 1.01
VPS16-201ENST00000380443 COX4I2Q96KJ9 171 aa21.38■■□□□ 1.01
VPS16-201ENST00000380443 LRFN3Q9BTN0 628 aa21.38■■□□□ 1.01
VPS16-201ENST00000380443 CENPOQ9BU64 300 aa21.38■■□□□ 1.01
VPS16-201ENST00000380443 FAIMQ9NVQ4 179 aa21.38■■□□□ 1.01
VPS16-201ENST00000380443 SIDT1Q9NXL6 827 aaKnown RBP21.38■■□□□ 1.01
VPS16-201ENST00000380443 H2AFY2Q9P0M6 372 aaPredicted RBP21.38■■□□□ 1.01
VPS16-201ENST00000380443 STUB1Q9UNE7 303 aa21.38■■□□□ 1.01
VPS16-201ENST00000380443 CLDN16Q9Y5I7 305 aa21.38■■□□□ 1.01
VPS16-201ENST00000380443 TGFBR3LH3BV60 316 aa21.37■■□□□ 1.01
VPS16-201ENST00000380443 NUDT21O43809 227 aaKnown RBP21.37■■□□□ 1.01
VPS16-201ENST00000380443 SULT1C4O75897 302 aa21.37■■□□□ 1.01
VPS16-201ENST00000380443 CKMT1AP12532 417 aa21.37■■□□□ 1.01
VPS16-201ENST00000380443 ATP12AP54707 1039 aa21.37■■□□□ 1.01
VPS16-201ENST00000380443 CDH11P55287 796 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms