RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 HEBP1Q9NRV9 189 aa11.74□□□□□ -0.53
CHD3-203ENST00000380358 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.73□□□□□ -0.53
CHD3-203ENST00000380358 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.73□□□□□ -0.53
CHD3-203ENST00000380358 C1orf226A1L170 272 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 GPX6P59796 221 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 RPL23AP62750 156 aaKnown RBP11.73□□□□□ -0.53
CHD3-203ENST00000380358 GLO1Q04760 184 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 METTL25Q8N6Q8 603 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 HPSE2Q8WWQ2 592 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 IGSF21Q96ID5 467 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 ZNF599Q96NL3 588 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 PAAF1Q9BRP4 392 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 FUCA2Q9BTY2 467 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 CLEC5AQ9NY25 188 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 WRAP73Q9P2S5 460 aaPredicted RBP11.73□□□□□ -0.53
CHD3-203ENST00000380358 TRAV27A0A087WT01 109 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 C8BP07358 591 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 CLINT1Q14677 625 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 ASB9Q96DX5 294 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 DERL2Q9GZP9 239 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 AJAP1Q9UKB5 411 aaPredicted RBP11.73□□□□□ -0.53
CHD3-203ENST00000380358 SOCS5O75159 536 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 RAB3BP20337 219 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 FBXO43Q4G163 708 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 BRICD5Q6PL45 260 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 RABEPKQ7Z6M1 372 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 CHST14Q8NCH0 376 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 DNAJB8Q8NHS0 232 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 IGSF8Q969P0 613 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 CASD1Q96PB1 797 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 OR6C1Q96RD1 312 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 PAQR5Q9NXK6 330 aaPredicted RBP11.73□□□□□ -0.53
CHD3-203ENST00000380358 CD1CP29017 333 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 PRMT2P55345 433 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 C14orf28Q4W4Y0 310 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 SUMF2Q8NBJ7 301 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 OR4A16Q8NH70 328 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 PAK1IP1Q9NWT1 392 aaPredicted RBP11.73□□□□□ -0.53
CHD3-203ENST00000380358 POM121CA8CG34 1229 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 MRPL33O75394 65 aaKnown RBP11.73□□□□□ -0.53
CHD3-203ENST00000380358 PABPC4LP0CB38 370 aaKnown RBP11.73□□□□□ -0.53
CHD3-203ENST00000380358 HOXD8P13378 290 aaPredicted RBP11.73□□□□□ -0.53
CHD3-203ENST00000380358 MGAT3Q09327 533 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 ILKQ13418 452 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 ATP6AP1Q15904 470 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 NDUFAF5Q5TEU4 345 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 PDE4DIPQ5VU43 2346 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 NXPE4Q6UWF7 544 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 PNPLA1Q8N8W4 532 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 MUS81Q96NY9 551 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 ABCG5Q9H222 651 aa11.73□□□□□ -0.53
CHD3-203ENST00000380358 PRAMEF2O60811 474 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 CHRNB1P11230 501 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 UBE2G2P60604 165 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 ACTA2P62736 377 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 ACTG2P63267 376 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 C3P1Q6ZMU1 363 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 CREB3L2Q70SY1 520 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 RDH10Q8IZV5 341 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 OR8J2Q8NGG1 315 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 TRMT61AQ96FX7 289 aaKnown RBP11.72□□□□□ -0.53
CHD3-203ENST00000380358 NKX3-1Q99801 234 aaPredicted RBP11.72□□□□□ -0.53
CHD3-203ENST00000380358 PATZ1Q9HBE1 687 aaKnown RBP11.72□□□□□ -0.53
CHD3-203ENST00000380358 NLKQ9UBE8 527 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 ARHGEF5Q12774 1597 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 B4DXG7 233 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 SERPINF1P36955 418 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 HNRNPFP52597 415 aaKnown RBP11.72□□□□□ -0.53
CHD3-203ENST00000380358 EFNA3P52797 238 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 DCAF4L2Q8NA75 395 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 SYNPRQ8TBG9 265 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 SGK3Q96BR1 496 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 MOAP1Q96BY2 351 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 FAM122AQ96E09 287 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 RBMXL1Q96E39 390 aaKnown RBP11.72□□□□□ -0.53
CHD3-203ENST00000380358 SMOQ99835 787 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 ZNF286AQ9HBT8 521 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 APMAPQ9HDC9 416 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 DZANK1Q9NVP4 752 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 DCAF16Q9NXF7 216 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 GPR160Q9UJ42 338 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 SLC22A5O76082 557 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 ONECUT2O95948 504 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 HEXAP06865 529 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 MAP2K3P46734 347 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 TAS2R38P59533 333 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 CCNJQ5T5M9 372 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 TMEM217Q8N7C4 229 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 OR2T4Q8NH00 348 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 NKD2Q969F2 451 aaPredicted RBP11.72□□□□□ -0.53
CHD3-203ENST00000380358 D6RAR5 112 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 F11P03951 625 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 HOXA9P31269 272 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 CXCL12P48061 93 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 CDC34P49427 236 aaPredicted RBP11.72□□□□□ -0.53
CHD3-203ENST00000380358 NANOGP8Q6NSW7 305 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 ARHGAP11AQ6P4F7 1023 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 ZFP90Q8TF47 636 aa11.72□□□□□ -0.53
CHD3-203ENST00000380358 SECTM1Q8WVN6 248 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms