RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 CEP76Q8TAP6 659 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 OR6C1Q96RD1 312 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 OR8D2Q9GZM6 311 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 TVP23BQ9NYZ1 205 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 TESQ9UGI8 421 aaKnown RBP18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 TCRBV16S1A1N1A0A5B0 115 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 NPIPB9F8W1W9 429 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 PTNP21246 168 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 ACVR2AP27037 513 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 HOXD12P35452 270 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 ACY1Q03154 408 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 NSDHLQ15738 373 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 WDR88Q6ZMY6 472 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 RASSF6Q6ZTQ3 369 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 GRAMD2AQ8IUY3 354 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 TCEANCQ8N8B7 351 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 NAT6Q93015 286 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 FUNDC2Q9BWH2 189 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 SLC7A5P2Q9GIP4 190 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 FBXO4Q9UKT5 387 aa18.33■□□□□ 0.53
PDLIM5-205ENST00000380180 TMEM221A6NGB7 291 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 M0R296 226 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 DYRK3O43781 588 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 ENTPD6O75354 484 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 LYPD3O95274 346 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 STSP08842 583 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 GPR4P46093 362 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 ATP12AP54707 1039 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 ST3GAL4Q11206 333 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 FGFBP1Q14512 234 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 ELAVL1Q15717 326 aaKnown RBP18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 SYT6Q5T7P8 510 aaPredicted RBP18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 RHBDD2Q6NTF9 364 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 OR8J1Q8NGP2 316 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 OR4C3Q8NH37 302 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 SLC2A12Q8TD20 617 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 ZNF721Q8TF20 911 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 ZNF559Q9BR84 538 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 EVA1AQ9H8M9 152 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 MKKSQ9NPJ1 570 aaPredicted RBP18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 MKL2Q9ULH7 1088 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 SRPK3Q9UPE1 567 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 DMDP11532 3685 aa18.33■□□□□ 0.52
PDLIM5-205ENST00000380180 BDP1A6H8Y1 2624 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 FRYLO94915 3013 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 ARHGAP33O14559 1287 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 KLF4O43474 513 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 ADAM11O75078 769 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 CER1O95813 267 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 DDAH2O95865 285 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 FPR3P25089 353 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 ACAA2P42765 397 aaKnown RBP18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 SLC38A9Q8NBW4 561 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 TEX47Q8TBZ9 253 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 RNF217Q8TC41 542 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 CCDC74BQ96LY2 380 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 SLC46A1Q96NT5 459 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 LMF1Q96S06 567 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 VN1R1Q9GZP7 353 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 SLC25A19Q9HC21 320 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 SLC22A11Q9NSA0 550 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 DNAJB12Q9NXW2 375 aaKnown RBP18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 CTSFQ9UBX1 484 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 PRKYO43930 277 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 NOL3O60936 208 aaKnown RBP18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 IGKV3-11P04433 115 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 LCKP06239 509 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 RORAP35398 523 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 STAT5AP42229 794 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 PPICP45877 212 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 SMSP52788 366 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 SH3BGRP55822 239 aaPredicted RBP18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 SLC23A3Q6PIS1 610 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 RABEPKQ7Z6M1 372 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 STX19Q8N4C7 294 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 POGLUT1Q8NBL1 392 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 OR8D4Q8NGM9 314 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 IFI44Q8TCB0 444 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 Q96MT0 163 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 POLDIP3Q9BY77 421 aaKnown RBP18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 TMEM27Q9HBJ8 222 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 DNAJC27Q9NZQ0 273 aa18.32■□□□□ 0.52
PDLIM5-205ENST00000380180 TLX2O43763 284 aaPredicted RBP18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 TIAF1O95411 115 aa18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 PSMB9P28065 219 aa18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 PCYT1AP49585 367 aa18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 PSMD4P55036 377 aaKnown RBP18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 LPAL2Q16609 132 aa18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 TMEM201Q5SNT2 666 aa18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 SLC27A4Q6P1M0 643 aa18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 ZNF613Q6PF04 617 aa18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 COX15Q7KZN9 410 aa18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 RAB2BQ8WUD1 216 aa18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 EFHD2Q96C19 240 aaPredicted RBP18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 PHOX2BQ99453 314 aa18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 DCUN1D5Q9BTE7 237 aa18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 NXF5Q9H1B4 397 aaKnown RBP18.31■□□□□ 0.52
PDLIM5-205ENST00000380180 C14orf105Q9NVL8 296 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms