RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 PRICKLE2Q7Z3G6 844 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 ADCK2Q7Z695 626 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 PIAS4Q8N2W9 510 aaPredicted RBP12.92□□□□□ -0.34
SF1-205ENST00000377394 HSD17B8Q92506 261 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 PTP4A1Q93096 173 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 C16orf58Q96GQ5 468 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 BBS4Q96RK4 519 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 MACROD1Q9BQ69 325 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 PINK1Q9BXM7 581 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 COPS3Q9UNS2 423 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 A0A0G2JPF8 293 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 HNRNPCL3B7ZW38 293 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 DVL2O14641 736 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 CASC3O15234 703 aaKnown RBP12.92□□□□□ -0.34
SF1-205ENST00000377394 UBXN7O94888 489 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 NTN1O95631 604 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 LIMS3P0CW19 117 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 LIMS4P0CW20 117 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 HNRNPCL4P0DMR1 293 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 ELK1P19419 428 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 POU3F2P20265 443 aaPredicted RBP12.92□□□□□ -0.34
SF1-205ENST00000377394 PRDX1Q06830 199 aaKnown RBP12.92□□□□□ -0.34
SF1-205ENST00000377394 ZIC1Q15915 447 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 MINDY4Q4G0A6 757 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 SLC27A4Q6P1M0 643 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 SHFQ7M4L6 423 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 LINC00469Q8N7U9 141 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 OR2A1Q8NGT9 310 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 CNRIP1Q96F85 164 aaPredicted RBP12.92□□□□□ -0.34
SF1-205ENST00000377394 ZDHHC4Q9NPG8 344 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 GPR55Q9Y2T6 319 aaPredicted RBP12.92□□□□□ -0.34
SF1-205ENST00000377394 MRPS23Q9Y3D9 190 aaKnown RBP12.92□□□□□ -0.34
SF1-205ENST00000377394 ASB4Q9Y574 426 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 MAB21L2Q9Y586 359 aa12.92□□□□□ -0.34
SF1-205ENST00000377394 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 A0A1W2PR48 441 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 A0A1W2PS29 197 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 IGLON5A6NGN9 336 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 ZNF98A6NK75 572 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 OR5K4A6NMS3 321 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 KDM4EB2RXH2 506 aaPredicted RBP12.91□□□□□ -0.34
SF1-205ENST00000377394 HNRNPA1P09651 372 aaKnown RBP eCLIP12.91□□□□□ -0.34
SF1-205ENST00000377394 SLC35G4P0C7Q5 338 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 NTSP30990 170 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 MTNR1AP48039 350 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 MAP4K2Q12851 820 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 IGSF11Q5DX21 431 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 C6orf132Q5T0Z8 1188 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 PIP5KL1Q5T9C9 394 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 CD200R1LQ6Q8B3 271 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 IL20RBQ6UXL0 311 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 KRT74Q7RTS7 529 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 TEX47Q8TBZ9 253 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 SFXN5Q8TD22 340 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 UFD1Q92890 307 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 ZNF707Q96C28 371 aaPredicted RBP12.91□□□□□ -0.34
SF1-205ENST00000377394 NXPE2Q96DL1 559 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 GIMAP5Q96F15 307 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 INSM2Q96T92 566 aaPredicted RBP12.91□□□□□ -0.34
SF1-205ENST00000377394 FAIM2Q9BWQ8 316 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 HDAC8Q9BY41 377 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 XKR8Q9H6D3 395 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 POLMQ9NP87 494 aaPredicted RBP12.91□□□□□ -0.34
SF1-205ENST00000377394 HCN3Q9P1Z3 774 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 DEC1Q9P2X7 70 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 ATG4BQ9Y4P1 393 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 DENND4AQ7Z401 1863 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 C2orf92A0A1B0GVN3 265 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 IRGMA1A4Y4 181 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 C7orf66A4D0T2 115 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 MFSD2BA6NFX1 497 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 SLC30A4O14863 429 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 ERAL1O75616 437 aaKnown RBP12.91□□□□□ -0.34
SF1-205ENST00000377394 PLATP00750 562 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 HOXB3P14651 431 aaPredicted RBP12.91□□□□□ -0.34
SF1-205ENST00000377394 BCL6P41182 706 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 ATP12AP54707 1039 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 TMEM35AQ53FP2 167 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 C17orf107Q6ZR85 190 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 CCDC116Q8IYX3 515 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 GNPDA2Q8TDQ7 276 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 ZG16BQ96DA0 208 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 ARHGDIGQ99819 225 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 ARHGAP9Q9BRR9 750 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 CRISPLD2Q9H0B8 497 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 EXTL2Q9UBQ6 330 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 CHST2Q9Y4C5 530 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 FAM170BA6NMN3 283 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 M0R233 179 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 FRS3O43559 492 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 DHFRP00374 187 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 LALBAP00709 142 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 FGF9P31371 208 aaPredicted RBP12.91□□□□□ -0.34
SF1-205ENST00000377394 GABRA5P31644 462 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 RPL35P42766 123 aaKnown RBP12.91□□□□□ -0.34
SF1-205ENST00000377394 TSPAN31Q12999 210 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 SLC9A5Q14940 896 aa12.91□□□□□ -0.34
SF1-205ENST00000377394 RNASE12Q5GAN4 147 aaKnown RBP12.91□□□□□ -0.34
SF1-205ENST00000377394 MRM1Q6IN84 353 aaKnown RBP12.91□□□□□ -0.34
SF1-205ENST00000377394 SPPL3Q8TCT6 385 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms