RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 NDUFS4O43181 175 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 UPK1BO75841 260 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 CCNB2O95067 398 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 CELA2AP08217 269 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 FBLP22087 321 aaKnown RBP11.49□□□□□ -0.57
VRK3-202ENST00000377011 AQP1P29972 269 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 CHI3L1P36222 383 aaPredicted RBP11.49□□□□□ -0.57
VRK3-202ENST00000377011 LIPAP38571 399 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 CDH12P55289 794 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 RAB8AP61006 207 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 LSM3P62310 102 aaKnown RBP11.49□□□□□ -0.57
VRK3-202ENST00000377011 IFITM3Q01628 133 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 C2orf80Q0P641 193 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 SSPNQ14714 243 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 EXOC3L2Q2M3D2 409 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 COX20Q5RI15 118 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 YOD1Q5VVQ6 348 aaPredicted RBP11.49□□□□□ -0.57
VRK3-202ENST00000377011 TMEM236Q5W0B7 351 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 PAGE2Q7Z2X7 111 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 SLC44A2Q8IWA5 706 aaPredicted RBP11.49□□□□□ -0.57
VRK3-202ENST00000377011 STX19Q8N4C7 294 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 NFKBIDQ8NI38 313 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 ZNF675Q8TD23 568 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 ZNF226Q9NYT6 803 aa11.49□□□□□ -0.57
VRK3-202ENST00000377011 UBR5O95071 2799 aaPredicted RBP11.49□□□□□ -0.57
VRK3-202ENST00000377011 A0A1W2PRB8 838 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 AGAP5A6NIR3 686 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 PDE9AO76083 593 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 OXSR1O95747 527 aaPredicted RBP11.48□□□□□ -0.57
VRK3-202ENST00000377011 ZNF888P0CJ79 500 aaPredicted RBP11.48□□□□□ -0.57
VRK3-202ENST00000377011 ADORA3P0DMS8 318 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 ETV6P41212 452 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 DSTNP60981 165 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 DSG2Q14126 1118 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 BCL2A1Q16548 175 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 CCDC92Q53HC0 331 aaPredicted RBP11.48□□□□□ -0.57
VRK3-202ENST00000377011 ANGPTL8Q6UXH0 198 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 CCDC103Q8IW40 242 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 KRT78Q8N1N4 520 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 CHAC2Q8WUX2 184 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 THAP4Q8WY91 577 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 RPL3LQ92901 407 aaKnown RBP11.48□□□□□ -0.57
VRK3-202ENST00000377011 UBE2FQ969M7 185 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 PITHD1Q9GZP4 211 aaPredicted RBP11.48□□□□□ -0.57
VRK3-202ENST00000377011 PELI2Q9HAT8 420 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 A4GALTQ9NPC4 353 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 ACER3Q9NUN7 267 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 FBXL4Q9UKA2 621 aa11.48□□□□□ -0.57
VRK3-202ENST00000377011 IGHV3-20A0A0C4DH32 117 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 PNMA8CA0A1B0GUJ8 204 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 ZAR1LA6NP61 321 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 SH3BGRLO75368 114 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 CEACAM4O75871 244 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 KLHL18O94889 574 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 SNX4O95219 450 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 GADD45GO95257 159 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 ADAP00813 363 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 IFNW1P05000 195 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 MMP11P24347 488 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 GADD45AP24522 165 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 TAS2R50P59544 299 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 MPEG1Q2M385 716 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 DEFB134Q4QY38 66 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 DCAF10Q5QP82 559 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 REEP3Q6NUK4 255 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 LANCL3Q6ZV70 420 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 SLC22A16Q86VW1 577 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 RNF130Q86XS8 419 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 OR11G2Q8NGC1 345 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 UTP15Q8TED0 518 aaKnown RBP11.47□□□□□ -0.57
VRK3-202ENST00000377011 RASSF5Q8WWW0 418 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 OR5P2Q8WZ92 322 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 SLC35B4Q969S0 331 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 NEURL3Q96EH8 262 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 TXNDC15Q96J42 360 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 QRFPRQ96P65 431 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 CRB3Q9BUF7 120 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 ALOXE3Q9BYJ1 711 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 RHBGQ9H310 441 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 WDR54Q9H977 334 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 SIAEQ9HAT2 523 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 NEUROD4Q9HD90 331 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 PRM3Q9NNZ6 103 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 PEX16Q9Y5Y5 336 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 DSPPQ9NZW4 1301 aa11.47□□□□□ -0.57
VRK3-202ENST00000377011 TTC36A6NLP5 189 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 B8ZZF3 427 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 CDC123O75794 336 aaPredicted RBP11.46□□□□□ -0.57
VRK3-202ENST00000377011 PTTG1O95997 202 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 OPN1SWP03999 348 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 SMIM10L1P0DMW3 83 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 CXCR2P25025 360 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 C21orf33P30042 268 aaPredicted RBP11.46□□□□□ -0.57
VRK3-202ENST00000377011 S100A5P33763 92 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 IDH2P48735 452 aaKnown RBP11.46□□□□□ -0.57
VRK3-202ENST00000377011 RGS6P49758 472 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 SNRPGP62308 76 aaKnown RBP11.46□□□□□ -0.57
VRK3-202ENST00000377011 FAM53BQ14153 422 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 GARNL3Q5VVW2 1013 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 MEDAGQ5VYS4 303 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms