RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SCAMP2O15127 329 aaKnown RBP18.89■□□□□ 0.61
VSX1-201ENST00000376707 PLGP00747 810 aaPredicted RBP18.89■□□□□ 0.61
VSX1-201ENST00000376707 CRYGSP22914 178 aa18.89■□□□□ 0.61
VSX1-201ENST00000376707 HOXC12P31275 282 aa18.89■□□□□ 0.61
VSX1-201ENST00000376707 CCKARP32238 428 aa18.89■□□□□ 0.61
VSX1-201ENST00000376707 RPL3P39023 403 aaKnown RBP18.89■□□□□ 0.61
VSX1-201ENST00000376707 ZNF844Q08AG5 666 aa18.89■□□□□ 0.61
VSX1-201ENST00000376707 EXOSC6Q5RKV6 272 aaKnown RBP18.89■□□□□ 0.61
VSX1-201ENST00000376707 ZAR1Q86SH2 424 aa18.89■□□□□ 0.61
VSX1-201ENST00000376707 MISPQ8IVT2 679 aa18.89■□□□□ 0.61
VSX1-201ENST00000376707 GTPBP8Q8N3Z3 284 aaPredicted RBP18.89■□□□□ 0.61
VSX1-201ENST00000376707 AGR3Q8TD06 166 aa18.89■□□□□ 0.61
VSX1-201ENST00000376707 ZBTB8AQ96BR9 441 aa18.89■□□□□ 0.61
VSX1-201ENST00000376707 FAM120BQ96EK7 910 aaKnown RBP18.89■□□□□ 0.61
VSX1-201ENST00000376707 PIK3IP1Q96FE7 263 aa18.89■□□□□ 0.61
VSX1-201ENST00000376707 SH3YL1Q96HL8 342 aaPredicted RBP18.89■□□□□ 0.61
VSX1-201ENST00000376707 C3orf30Q96M34 536 aa18.89■□□□□ 0.61
VSX1-201ENST00000376707 PARD6BQ9BYG5 372 aa18.89■□□□□ 0.61
VSX1-201ENST00000376707 GSX1Q9H4S2 264 aaPredicted RBP18.89■□□□□ 0.61
VSX1-201ENST00000376707 PAQR5Q9NXK6 330 aaPredicted RBP18.89■□□□□ 0.61
VSX1-201ENST00000376707 MAP1AP78559 2803 aaPredicted RBP18.89■□□□□ 0.61
VSX1-201ENST00000376707 ZNF469Q96JG9 3925 aaPredicted RBP18.88■□□□□ 0.61
VSX1-201ENST00000376707 A0A1W2PRB8 838 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 DEFB108AA8MXU0 73 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 SIAH2O43255 324 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 PEX11AO75192 247 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 HSPA4LO95757 839 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 SLC6A8P48029 635 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 CTBP2P56545 445 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 POU6F2P78424 691 aaPredicted RBP18.88■□□□□ 0.61
VSX1-201ENST00000376707 NKX6-1P78426 367 aaPredicted RBP18.88■□□□□ 0.61
VSX1-201ENST00000376707 GUSBP1Q15486 140 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 EXOC3L2Q2M3D2 409 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 KRTAP21-3Q3LHN1 58 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 KRT71Q3SY84 523 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 ATP6AP1LQ52LC2 224 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 C6orf136Q5SQH8 315 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 CCNJQ5T5M9 372 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 ZNF550Q7Z398 422 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 OR10D3Q8NH80 312 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 ACTRT2Q8TDY3 377 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 ZC3HAV1LQ96H79 300 aaKnown RBP18.88■□□□□ 0.61
VSX1-201ENST00000376707 RNF145Q96MT1 663 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 BTBD2Q9BX70 525 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 KLHL4Q9C0H6 718 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 SSU72Q9NP77 194 aaKnown RBP18.88■□□□□ 0.61
VSX1-201ENST00000376707 MED17Q9NVC6 651 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 FBXO34Q9NWN3 711 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 GIMAP2Q9UG22 337 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 MCTS1Q9ULC4 181 aaKnown RBP18.88■□□□□ 0.61
VSX1-201ENST00000376707 SNX8Q9Y5X2 465 aa18.88■□□□□ 0.61
VSX1-201ENST00000376707 C7orf72A4D263 438 aa18.87■□□□□ 0.61
VSX1-201ENST00000376707 LYPLA1O75608 230 aaPredicted RBP18.87■□□□□ 0.61
VSX1-201ENST00000376707 SYNGR4O95473 234 aa18.87■□□□□ 0.61
VSX1-201ENST00000376707 OPN1LWP04000 364 aa18.87■□□□□ 0.61
VSX1-201ENST00000376707 HMGN2P05204 90 aaKnown RBP18.87■□□□□ 0.61
VSX1-201ENST00000376707 ME2P23368 584 aa18.87■□□□□ 0.61
VSX1-201ENST00000376707 RAC1P63000 192 aa18.87■□□□□ 0.61
VSX1-201ENST00000376707 LASP1Q14847 261 aaKnown RBP18.87■□□□□ 0.61
VSX1-201ENST00000376707 PLPPR5Q32ZL2 321 aa18.87■□□□□ 0.61
VSX1-201ENST00000376707 CPTPQ5TA50 214 aa18.87■□□□□ 0.61
VSX1-201ENST00000376707 OR7A2PQ8NGA2 310 aa18.87■□□□□ 0.61
VSX1-201ENST00000376707 OR6K3Q8NGY3 331 aa18.87■□□□□ 0.61
VSX1-201ENST00000376707 GMPPAQ96IJ6 420 aaPredicted RBP18.87■□□□□ 0.61
VSX1-201ENST00000376707 DUSP22Q9NRW4 184 aa18.87■□□□□ 0.61
VSX1-201ENST00000376707 SIRT3Q9NTG7 399 aaPredicted RBP18.87■□□□□ 0.61
VSX1-201ENST00000376707 RAB21Q9UL25 225 aa18.87■□□□□ 0.61
VSX1-201ENST00000376707 CLEC4AQ9UMR7 237 aa18.87■□□□□ 0.61
VSX1-201ENST00000376707 A0A1W2PQD3 144 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 CXCL13O43927 109 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 ATP6V1C1P21283 382 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 PTGR1Q14914 329 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 PDSS1Q5T2R2 415 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 SHEQ5VZ18 495 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 ANKRD34AQ69YU3 496 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 CXorf67Q86X51 503 aaPredicted RBP18.86■□□□□ 0.61
VSX1-201ENST00000376707 NUDCD3Q8IVD9 361 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 OR2V1Q8NHB1 315 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 B4GALNT2Q8NHY0 566 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 PSMA8Q8TAA3 256 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 CDS1Q92903 461 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 PIGTQ969N2 578 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 ADGRG7Q96K78 797 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 STACQ99469 402 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 NPAS1Q99742 590 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 PIGUQ9H490 435 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 TMEM185BQ9H7F4 350 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 UBTD1Q9HAC8 227 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 ATAD3AQ9NVI7 634 aa18.86■□□□□ 0.61
VSX1-201ENST00000376707 TNFSF11O14788 317 aa18.85■□□□□ 0.61
VSX1-201ENST00000376707 ADAMDEC1O15204 470 aa18.85■□□□□ 0.61
VSX1-201ENST00000376707 BIRC5O15392 142 aa18.85■□□□□ 0.61
VSX1-201ENST00000376707 RGS16O15492 202 aaPredicted RBP18.85■□□□□ 0.61
VSX1-201ENST00000376707 ARHGEF9O43307 516 aa18.85■□□□□ 0.61
VSX1-201ENST00000376707 SS18L1O75177 396 aaPredicted RBP18.85■□□□□ 0.61
VSX1-201ENST00000376707 SKAP2O75563 359 aaPredicted RBP18.85■□□□□ 0.61
VSX1-201ENST00000376707 LAMP1P11279 417 aa18.85■□□□□ 0.61
VSX1-201ENST00000376707 PSMA4P25789 261 aaKnown RBP18.85■□□□□ 0.61
VSX1-201ENST00000376707 CD226Q15762 336 aa18.85■□□□□ 0.61
VSX1-201ENST00000376707 CTU2Q2VPK5 515 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms