RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 KCNAB1Q14722 419 aa16.99■□□□□ 0.31
RXRB-202ENST00000374685 ATAD3CQ5T2N8 411 aa16.99■□□□□ 0.31
RXRB-202ENST00000374685 STEAP3Q658P3 488 aa16.99■□□□□ 0.31
RXRB-202ENST00000374685 SLC51BQ86UW2 128 aa16.99■□□□□ 0.31
RXRB-202ENST00000374685 SAMD14Q8IZD0 417 aaPredicted RBP16.99■□□□□ 0.31
RXRB-202ENST00000374685 ARL14Q8N4G2 192 aa16.99■□□□□ 0.31
RXRB-202ENST00000374685 GRPEL2Q8TAA5 225 aa16.99■□□□□ 0.31
RXRB-202ENST00000374685 DPH1Q9BZG8 443 aa16.99■□□□□ 0.31
RXRB-202ENST00000374685 SLC25A19Q9HC21 320 aa16.99■□□□□ 0.31
RXRB-202ENST00000374685 ATP13A2Q9NQ11 1180 aa16.99■□□□□ 0.31
RXRB-202ENST00000374685 PTGFRNQ9P2B2 879 aa16.99■□□□□ 0.31
RXRB-202ENST00000374685 RPL36Q9Y3U8 105 aaKnown RBP16.99■□□□□ 0.31
RXRB-202ENST00000374685 PCDH15Q96QU1 1955 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 OR5K4A6NMS3 321 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 CDC42EP2O14613 210 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 STX11O75558 287 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 PRKAR1BP31321 381 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 SEPHS1P49903 392 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 CCR5P51681 352 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 RPL6Q02878 288 aaKnown RBP16.98■□□□□ 0.31
RXRB-202ENST00000374685 SSX1Q16384 188 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 RNF44Q7L0R7 432 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 SYT13Q7L8C5 426 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 PFN4Q8NHR9 129 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 ZNF582Q96NG8 517 aaPredicted RBP16.98■□□□□ 0.31
RXRB-202ENST00000374685 SLA2Q9H6Q3 261 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 TOR4AQ9NXH8 423 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 STMN3Q9NZ72 180 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 SRFP11831 508 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 MAOAP21397 527 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 TGM4P49221 684 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 SNRPGP62308 76 aaKnown RBP16.98■□□□□ 0.31
RXRB-202ENST00000374685 SPHARQ15513 63 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 PRICKLE4Q2TBC4 344 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 ARHGAP11BQ3KRB8 267 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 FCRLBQ6BAA4 426 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 HEPHL1Q6MZM0 1159 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 CYP4Z2PQ8N1L4 340 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 VWA5B2Q8N398 1253 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 IL17RDQ8NFM7 739 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 PHF7Q9BWX1 381 aaPredicted RBP16.98■□□□□ 0.31
RXRB-202ENST00000374685 SEMA6CQ9H3T2 930 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 PIGUQ9H490 435 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 UBE2ZQ9H832 354 aaPredicted RBP16.98■□□□□ 0.31
RXRB-202ENST00000374685 CNOT2Q9NZN8 540 aaKnown RBP16.98■□□□□ 0.31
RXRB-202ENST00000374685 POMT2Q9UKY4 750 aa16.98■□□□□ 0.31
RXRB-202ENST00000374685 B8ZZF3 427 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 SYT5O00445 386 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 COX10Q12887 443 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 ZNF267Q14586 743 aaPredicted RBP16.97■□□□□ 0.31
RXRB-202ENST00000374685 IRF3Q14653 427 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 ZNF367Q7RTV3 350 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 LHFPL3Q86UP9 236 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 ZFPM2Q8WW38 1151 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 ANKRD9Q96BM1 317 aaPredicted RBP16.97■□□□□ 0.31
RXRB-202ENST00000374685 MMABQ96EY8 250 aaPredicted RBP16.97■□□□□ 0.31
RXRB-202ENST00000374685 RBM18Q96H35 190 aaKnown RBP16.97■□□□□ 0.31
RXRB-202ENST00000374685 SAMD8Q96LT4 415 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 PTCHD1Q96NR3 888 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 DEPDC7Q96QD5 511 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 LYRM4Q9HD34 91 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 AGAP5A6NIR3 686 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 IFNA16P05015 189 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 HBQ1P09105 142 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 ATP6V1E1P36543 226 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 IFNGR2P38484 337 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 ETV5P41161 510 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 OMPP47874 163 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 CSNK1EP49674 416 aaKnown RBP16.97■□□□□ 0.31
RXRB-202ENST00000374685 ETV1P50549 477 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 MRPS15P82914 257 aaKnown RBP16.97■□□□□ 0.31
RXRB-202ENST00000374685 ZNF404Q494X3 552 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 BBS1Q8NFJ9 593 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 GNPDA2Q8TDQ7 276 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 CRELD1Q96HD1 420 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 OPALINQ96PE5 141 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 ORAI3Q9BRQ5 295 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 TMEM246Q9BRR3 403 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 CDCA4Q9BXL8 241 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 OSGIN1Q9UJX0 560 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 FBXL21Q9UKT6 434 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 DTX4Q9Y2E6 619 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 YARS2Q9Y2Z4 477 aaKnown RBP16.97■□□□□ 0.31
RXRB-202ENST00000374685 HTR2AP28223 471 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 CD38P28907 300 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 CSTF2P33240 577 aaKnown RBP eCLIP16.97■□□□□ 0.31
RXRB-202ENST00000374685 AMZ1Q400G9 498 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 FLYWCH1Q4VC44 716 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 PRAMEF17Q5VTA0 474 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 WDR88Q6ZMY6 472 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 CCDC28AQ8IWP9 274 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 OR52I1Q8NGK6 324 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 ACOT11Q8WXI4 607 aaPredicted RBP16.97■□□□□ 0.31
RXRB-202ENST00000374685 GATAD2BQ8WXI9 593 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 RNFT2Q96EX2 444 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 HSPA12BQ96MM6 686 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 C20orf141Q9NUB4 165 aa16.97■□□□□ 0.31
RXRB-202ENST00000374685 ERVH48-1M5A8F1 160 aa16.96■□□□□ 0.31
RXRB-202ENST00000374685 DSCR3O14972 297 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms