RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 DBIP07108 87 aaKnown RBP13.68□□□□□ -0.22
HSPG2-201ENST00000374673 ETS2P15036 469 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 GDF1P27539 372 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 MSX1P28360 303 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 MAGEA5P43359 124 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 SLC7A2P52569 658 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 PSME3P61289 254 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 C19orf57Q0VDD7 668 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 VMACQ2NL98 169 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 CMPK2Q5EBM0 449 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 OR5M10Q6IEU7 315 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 ERICH5Q6P6B1 374 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 PRICKLE2Q7Z3G6 844 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 PEX5LQ8IYB4 626 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 PGAM4Q8N0Y7 254 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 OR2M3Q8NG83 312 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 PHOSPHO1Q8TCT1 267 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 REXO5Q96IC2 774 aaKnown RBP13.68□□□□□ -0.22
HSPG2-201ENST00000374673 GPR137Q96N19 417 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.68□□□□□ -0.22
HSPG2-201ENST00000374673 NDE1Q9NXR1 346 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 SLC35A3Q9Y2D2 325 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 L3MBTL1Q9Y468 752 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 FREM3P0C091 2139 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 SPENQ96T58 3664 aaKnown RBP13.67□□□□□ -0.22
HSPG2-201ENST00000374673 NPIPA5E9PKD4 350 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 NME4O00746 187 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 EIF4E2O60573 245 aaKnown RBP13.67□□□□□ -0.22
HSPG2-201ENST00000374673 IGHG3P01860 377 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 HPNP05981 417 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 THBS1P07996 1170 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 T-ENOLP0DO92 83 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 EDN3P14138 238 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 SRD5A2P31213 254 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 PCGF2P35227 344 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 PCBP3P57721 371 aaKnown RBP13.67□□□□□ -0.22
HSPG2-201ENST00000374673 EEFSECP57772 596 aaKnown RBP13.67□□□□□ -0.22
HSPG2-201ENST00000374673 KCNJ10P78508 379 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 TLE1Q04724 770 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 KRTCAP3Q53RY4 240 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 C16orf89Q6UX73 402 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 CMIPQ8IY22 773 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 FAM71CQ8NEG0 241 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 OR4K17Q8NGC6 315 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 OR52P1PQ8NH57 321 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 WDR60Q8WVS4 1066 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 MIB2Q96AX9 1013 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 DSN1Q9H410 356 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 ACKR4Q9NPB9 350 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 SPAG4Q9NPE6 437 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 PLSCR2Q9NRY7 297 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 MED11Q9P086 117 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 FBXL2Q9UKC9 423 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 NPIPA1Q9UND3 350 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 IFT52Q9Y366 437 aa13.67□□□□□ -0.22
HSPG2-201ENST00000374673 MRPS18CQ9Y3D5 142 aaKnown RBP13.67□□□□□ -0.22
HSPG2-201ENST00000374673 GPC6Q9Y625 555 aaPredicted RBP13.67□□□□□ -0.22
HSPG2-201ENST00000374673 CCT8L1PA6NM43 557 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 ZNF264O43296 627 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 UBOX5O94941 541 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 CSTAP01040 98 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 CELA3AP09093 270 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 PABPC4LP0CB38 370 aaKnown RBP13.66□□□□□ -0.22
HSPG2-201ENST00000374673 UBL4AP11441 157 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 NID1P14543 1247 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 IL7RP16871 459 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 PGM1P36871 562 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 P2RX1P51575 399 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 SUMO3P55854 103 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-201ENST00000374673 DSCR4P56555 118 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-201ENST00000374673 CBX1P83916 185 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 MXRA7P84157 204 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 SLC25A3Q00325 362 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 ZNF117Q03924 483 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 VEZF1Q14119 521 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 GANABQ14697 944 aaKnown RBP13.66□□□□□ -0.22
HSPG2-201ENST00000374673 SLC10A1Q14973 349 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 LIN52Q52LA3 116 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 INTS11Q5TA45 600 aaKnown RBP13.66□□□□□ -0.22
HSPG2-201ENST00000374673 EIF3MQ7L2H7 374 aaKnown RBP13.66□□□□□ -0.22
HSPG2-201ENST00000374673 HMGN2P46Q86SG4 172 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 KRT73Q86Y46 540 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 TOR1AIP2Q8NFQ8 470 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 OR2T12Q8NG77 320 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 B4GALNT2Q8NHY0 566 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 FBXO27Q8NI29 283 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 SPATA5L1Q9BVQ7 753 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 OR2B2Q9GZK3 357 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 DEFB127Q9H1M4 99 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 TSPAN10Q9H1Z9 355 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-201ENST00000374673 ALG2Q9H553 416 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 PIF1Q9H611 641 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 PTGES2Q9H7Z7 377 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 CACYBPQ9HB71 228 aaKnown RBP13.66□□□□□ -0.22
HSPG2-201ENST00000374673 TMEM181Q9P2C4 612 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 ICAM5Q9UMF0 924 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 ZNF443Q9Y2A4 671 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-201ENST00000374673 CARD8Q9Y2G2 431 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 HEATR5AQ86XA9 2040 aa13.66□□□□□ -0.22
HSPG2-201ENST00000374673 SPTA1P02549 2419 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms