RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TIFABQ6ZNK6 161 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 ZNF572Q7Z3I7 529 aaPredicted RBP13.5□□□□□ -0.25
TRAF1-201ENST00000373887 MEX3DQ86XN8 651 aaKnown RBP13.5□□□□□ -0.25
TRAF1-201ENST00000373887 NRMQ8IXM6 262 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 COQ10AQ96MF6 247 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 COG8Q96MW5 612 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 ARMC1Q9NVT9 282 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 LRIT1Q9P2V4 623 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 SCML1Q9UN30 329 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 B3GNT3Q9Y2A9 372 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 FAM230AA0A1W2PPH8 454 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 PRSS38A1L453 326 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 LRRTM2O43300 516 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 ACTBP60709 375 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 ACTG1P63261 375 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 SLX4IPQ5VYV7 408 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 LARP4Q71RC2 724 aaKnown RBP eCLIP13.5□□□□□ -0.25
TRAF1-201ENST00000373887 OR8J1Q8NGP2 316 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 ACAD8Q9UKU7 415 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 LILRB3O75022 631 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 ITGB7P26010 798 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 SCAPQ12770 1279 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 KIAA0895LQ68EN5 471 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 OR5L2Q8NGL0 311 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 BSCL2Q96G97 398 aaPredicted RBP13.5□□□□□ -0.25
TRAF1-201ENST00000373887 RANBP9Q96S59 729 aa13.5□□□□□ -0.25
TRAF1-201ENST00000373887 AK6Q9Y3D8 172 aaKnown RBP13.5□□□□□ -0.25
TRAF1-201ENST00000373887 H3BML4 177 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 LDB3O75112 727 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 UGT2B7P16662 529 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 HRH2P25021 359 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 HTR1EP28566 365 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 MTNR1AP48039 350 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 ZNF789Q5FWF6 425 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 NKAIN2Q5VXU1 208 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 ZNF765Q7L2R6 523 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 SERPINA12Q8IW75 414 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 TEX26Q8N6G2 289 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 SENP5Q96HI0 755 aaPredicted RBP13.49□□□□□ -0.25
TRAF1-201ENST00000373887 SAMD8Q96LT4 415 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 HYLS1Q96M11 299 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 LPAR4Q99677 370 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 IL26Q9NPH9 171 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 VSX1Q9NZR4 365 aaPredicted RBP13.49□□□□□ -0.25
TRAF1-201ENST00000373887 PHYHO14832 338 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 CDK1P06493 297 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 KIAA1211LQ6NV74 962 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 SGPP2Q8IWX5 399 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 TMEM185AQ8NFB2 350 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 OR2A12Q8NGT7 310 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 ST7LQ8TDW4 575 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 RDH14Q9HBH5 336 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 CCM2LQ9NUG4 571 aaPredicted RBP13.49□□□□□ -0.25
TRAF1-201ENST00000373887 SDHDO14521 159 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 EEDO75530 441 aaKnown RBP13.49□□□□□ -0.25
TRAF1-201ENST00000373887 STK17BO94768 372 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 FDXRP22570 491 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 GALNT1Q10472 559 aaPredicted RBP13.49□□□□□ -0.25
TRAF1-201ENST00000373887 STK11Q15831 433 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 C14orf28Q4W4Y0 310 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 PM20D1Q6GTS8 502 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 CMTM1Q8IZ96 169 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 ZNF808Q8N4W9 903 aaPredicted RBP13.49□□□□□ -0.25
TRAF1-201ENST00000373887 TOX2Q96NM4 488 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 ALOXE3Q9BYJ1 711 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 KLHL13Q9P2N7 655 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 MED16Q9Y2X0 877 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 SOBPA7XYQ1 873 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 EFCAB7A8K855 629 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 ZIC2O95409 532 aaPredicted RBP13.49□□□□□ -0.25
TRAF1-201ENST00000373887 CER1O95813 267 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 SNRNP70P08621 437 aaKnown RBP13.49□□□□□ -0.25
TRAF1-201ENST00000373887 TIMP2P16035 220 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 NKX3-2P78367 333 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 OR52E8Q6IFG1 317 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 WDR53Q7Z5U6 358 aaPredicted RBP13.49□□□□□ -0.25
TRAF1-201ENST00000373887 SLC15A4Q8N697 577 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 IL1F10Q8WWZ1 152 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 DPH1Q9BZG8 443 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 CD300AQ9UGN4 299 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 CD300LBA8K4G0 201 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 BCAT2O15382 392 aaPredicted RBP13.49□□□□□ -0.25
TRAF1-201ENST00000373887 ZNF43P17038 809 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 ENDOUP21128 410 aaKnown RBP13.49□□□□□ -0.25
TRAF1-201ENST00000373887 CD38P28907 300 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 KDELR2P33947 212 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 IRS1P35568 1242 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 PNCKQ6P2M8 343 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 ZNF551Q7Z340 670 aaPredicted RBP13.49□□□□□ -0.25
TRAF1-201ENST00000373887 SYT14Q8NB59 555 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 SUMF2Q8NBJ7 301 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 OR52E1Q8NGJ3 308 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 VDAC3Q9Y277 283 aa13.49□□□□□ -0.25
TRAF1-201ENST00000373887 MAGED1Q9Y5V3 778 aaPredicted RBP13.49□□□□□ -0.25
TRAF1-201ENST00000373887 PSMB5P28074 263 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 P2RY14Q15391 338 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 HTR3DQ70Z44 454 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 MAMDC2Q7Z304 686 aaPredicted RBP13.48□□□□□ -0.25
TRAF1-201ENST00000373887 SNX18Q96RF0 628 aa13.48□□□□□ -0.25
TRAF1-201ENST00000373887 SLC7A7Q9UM01 511 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms