RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 PTGFRNQ9P2B2 879 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 MALT1Q9UDY8 824 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 CD8B2A6NJW9 211 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 CD8BP10966 210 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 GABRG2P18507 467 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 GABRA3P34903 492 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 ATP6V1E1P36543 226 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 NR4A2P43354 598 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 DEFA1P59665 94 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 DEFA3P59666 94 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 DAB2P98082 770 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 MGAT2Q10469 447 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 ADAM15Q13444 863 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 GJD3Q8N144 294 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 GRHL3Q8TE85 626 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 SLC37A2Q8TED4 501 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 MAT2BQ9NZL9 334 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 TRAPPC4Q9Y296 219 aa22.12■■□□□ 1.13
CDK9-201ENST00000373264 EXOSC1Q9Y3B2 195 aaKnown RBP22.12■■□□□ 1.13
CDK9-201ENST00000373264 STK25O00506 426 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 SLC30A4O14863 429 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 RFPL3O75679 317 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 LYPD3O95274 346 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 IFI30P13284 250 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 PRICKLE4Q2TBC4 344 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 KLBQ86Z14 1044 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 ZNF619Q8N2I2 560 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 ZNF614Q8N883 585 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 OR4N2Q8NGD1 307 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 BAHD1Q8TBE0 780 aaPredicted RBP22.11■■□□□ 1.13
CDK9-201ENST00000373264 ITFG2Q969R8 447 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 DIRAS2Q96HU8 199 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 ZNF223Q9UK11 482 aaPredicted RBP22.11■■□□□ 1.13
CDK9-201ENST00000373264 LRP4O75096 1905 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 SLC35F4A4IF30 521 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 HRO43593 1189 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 RDH16O75452 317 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 GLYR1Q49A26 553 aaPredicted RBP22.11■■□□□ 1.13
CDK9-201ENST00000373264 NCCRP1Q6ZVX7 275 aaPredicted RBP22.11■■□□□ 1.13
CDK9-201ENST00000373264 OR13C2Q8NGS9 318 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 ASB12Q8WXK4 309 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 RSC1A1Q92681 617 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 RIPOR3Q96MK2 946 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 IL21RQ9HBE5 538 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 COMMD3Q9UBI1 195 aa22.11■■□□□ 1.13
CDK9-201ENST00000373264 SIRT4Q9Y6E7 314 aaPredicted RBP22.11■■□□□ 1.13
CDK9-201ENST00000373264 HRKO00198 91 aa22.1■■□□□ 1.13
CDK9-201ENST00000373264 STX11O75558 287 aa22.1■■□□□ 1.13
CDK9-201ENST00000373264 CDC123O75794 336 aaPredicted RBP22.1■■□□□ 1.13
CDK9-201ENST00000373264 ILF3Q12906 894 aaKnown RBP eCLIP22.1■■□□□ 1.13
CDK9-201ENST00000373264 CXXC5Q7LFL8 322 aaKnown RBP22.1■■□□□ 1.13
CDK9-201ENST00000373264 MSLNLQ96KJ4 702 aa22.1■■□□□ 1.13
CDK9-201ENST00000373264 TWSG1Q9GZX9 223 aa22.1■■□□□ 1.13
CDK9-201ENST00000373264 MMP28Q9H239 520 aa22.1■■□□□ 1.13
CDK9-201ENST00000373264 SIDT1Q9NXL6 827 aaKnown RBP22.1■■□□□ 1.13
CDK9-201ENST00000373264 CLDND1Q9NY35 253 aa22.1■■□□□ 1.13
CDK9-201ENST00000373264 TRAV27A0A087WT01 109 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 CDHR4A6H8M9 788 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 SNTNA6NMZ2 147 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 TFECO14948 347 aaPredicted RBP22.09■■□□□ 1.13
CDK9-201ENST00000373264 CLUP10909 449 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 GABRA5P31644 462 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 SLC9A3P48764 834 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 CA13Q8N1Q1 262 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 CSNK1A1LQ8N752 337 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 TMEM99Q8N816 258 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 OR9A4Q8NGU2 314 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 FANK1Q8TC84 345 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 PTCHD1Q96NR3 888 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 NLGN3Q9NZ94 848 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 USP36Q9P275 1121 aaKnown RBP22.09■■□□□ 1.13
CDK9-201ENST00000373264 FBXL4Q9UKA2 621 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 UNC119BA6NIH7 251 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 ATP1B1P05026 303 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 TBXA2RP21731 343 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 TMEM239Q8WW34 195 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 NR4A3Q92570 626 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 WDFY2Q96P53 400 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 SCML1Q9UN30 329 aa22.09■■□□□ 1.13
CDK9-201ENST00000373264 TRAPPC13A5PLN9 417 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 A8MV72 311 aaPredicted RBP22.08■■□□□ 1.13
CDK9-201ENST00000373264 REM1O75628 298 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 GPR75O95800 540 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 APOA1P02647 267 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 NID1P14543 1247 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 RPS4Y1P22090 263 aaKnown RBP22.08■■□□□ 1.13
CDK9-201ENST00000373264 HTR1FP30939 366 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 ARMC4Q5T2S8 1044 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 RANBP3LQ86VV4 465 aaPredicted RBP22.08■■□□□ 1.13
CDK9-201ENST00000373264 ARIH2OSQ8N7S6 290 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 OR51A7Q8NH64 312 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 CNOT9Q92600 299 aaKnown RBP22.08■■□□□ 1.13
CDK9-201ENST00000373264 ANKRD9Q96BM1 317 aaPredicted RBP22.08■■□□□ 1.13
CDK9-201ENST00000373264 TIMP4Q99727 224 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 TMEM165Q9HC07 324 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 FABP12A6NFH5 140 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 URADA6NGE7 173 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 CASKO14936 926 aa22.08■■□□□ 1.13
CDK9-201ENST00000373264 GALR3O60755 368 aaPredicted RBP22.08■■□□□ 1.13
CDK9-201ENST00000373264 CSF3P09919 207 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms