RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 VDAC3Q9Y277 283 aa20.47■□□□□ 0.87
COL9A2-201ENST00000372736 CSMD2Q7Z408 3487 aa20.46■□□□□ 0.87
COL9A2-201ENST00000372736 C9JVG2 144 aa20.46■□□□□ 0.87
COL9A2-201ENST00000372736 H0YC42 278 aa20.46■□□□□ 0.87
COL9A2-201ENST00000372736 H3BML4 177 aa20.46■□□□□ 0.87
COL9A2-201ENST00000372736 ZNF195O14628 629 aa20.46■□□□□ 0.87
COL9A2-201ENST00000372736 TMIGD3P0DMS9 266 aaPredicted RBP20.46■□□□□ 0.87
COL9A2-201ENST00000372736 SUCLG1P53597 346 aaKnown RBP20.46■□□□□ 0.87
COL9A2-201ENST00000372736 TPD52P55327 224 aaPredicted RBP20.46■□□□□ 0.87
COL9A2-201ENST00000372736 FBXL19-AS1Q494R0 122 aa20.46■□□□□ 0.87
COL9A2-201ENST00000372736 SLC9B1Q4ZJI4 515 aa20.46■□□□□ 0.87
COL9A2-201ENST00000372736 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.46■□□□□ 0.87
COL9A2-201ENST00000372736 UBQLNLQ8IYU4 475 aa20.46■□□□□ 0.87
COL9A2-201ENST00000372736 CHDHQ8NE62 594 aaPredicted RBP20.46■□□□□ 0.87
COL9A2-201ENST00000372736 MIPOL1Q8TD10 442 aa20.46■□□□□ 0.87
COL9A2-201ENST00000372736 SH3YL1Q96HL8 342 aaPredicted RBP20.46■□□□□ 0.87
COL9A2-201ENST00000372736 ZFP3Q96NJ6 502 aa20.46■□□□□ 0.87
COL9A2-201ENST00000372736 CCDC115Q96NT0 180 aa20.46■□□□□ 0.87
COL9A2-201ENST00000372736 PCDHGB4Q9UN71 923 aa20.46■□□□□ 0.87
COL9A2-201ENST00000372736 A0A087WZY1 265 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 RCBTB2O95199 551 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 CPSF4O95639 269 aaKnown RBP20.45■□□□□ 0.86
COL9A2-201ENST00000372736 IL18BPO95998 194 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 ZNF17P17021 662 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 MATN1P21941 496 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 UQCRC2P22695 453 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 S100A3P33764 101 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 OPRM1P35372 400 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 AGFG1P52594 562 aaKnown RBP20.45■□□□□ 0.86
COL9A2-201ENST00000372736 CLDN20P56880 219 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 FOXF2Q12947 444 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 PLPPR5Q32ZL2 321 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 FLYWCH1Q4VC44 716 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 KLHL26Q53HC5 615 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 GRAMD2AQ8IUY3 354 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 GTPBP8Q8N3Z3 284 aaPredicted RBP20.45■□□□□ 0.86
COL9A2-201ENST00000372736 MEIOBQ8N635 442 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 VPS37AQ8NEZ2 397 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 PIWIL2Q8TC59 973 aaKnown RBP20.45■□□□□ 0.86
COL9A2-201ENST00000372736 ACTRT2Q8TDY3 377 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 LURAP1Q96LR2 239 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 SDF2Q99470 211 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 NPAS1Q99742 590 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 HOXD1Q9GZZ0 328 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 MED17Q9NVC6 651 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 BTNL2Q9UIR0 455 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 L3MBTL1Q9Y468 752 aa20.45■□□□□ 0.86
COL9A2-201ENST00000372736 C7orf72A4D263 438 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 SYT5O00445 386 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 SEC14L5O43304 696 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 OIP5O43482 229 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 TGM6O95932 706 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 H2AFXP16104 143 aaPredicted RBP20.44■□□□□ 0.86
COL9A2-201ENST00000372736 RNF144AP50876 292 aaPredicted RBP20.44■□□□□ 0.86
COL9A2-201ENST00000372736 ATP12AP54707 1039 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 ZNF117Q03924 483 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 TLE4Q04727 773 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 SAXO2Q658L1 398 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 NXNQ6DKJ4 435 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 MTERF4Q7Z6M4 381 aaKnown RBP20.44■□□□□ 0.86
COL9A2-201ENST00000372736 GCNT2Q8N0V5 402 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 ZNF527Q8NB42 609 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 B4GALNT2Q8NHY0 566 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 SFXN3Q9BWM7 321 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 OR51I1Q9H343 314 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 JKAMPQ9P055 326 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 KCNN3Q9UGI6 736 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 AP4B1Q9Y6B7 739 aa20.44■□□□□ 0.86
COL9A2-201ENST00000372736 DUXAA6NLW8 204 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 AK1P00568 194 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 PGRP06401 933 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 PSMA4P25789 261 aaKnown RBP20.43■□□□□ 0.86
COL9A2-201ENST00000372736 ZNF41P51814 821 aaPredicted RBP20.43■□□□□ 0.86
COL9A2-201ENST00000372736 CASP9P55211 416 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 KRTAP10-9P60411 292 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 PDCD4Q53EL6 469 aaKnown RBP20.43■□□□□ 0.86
COL9A2-201ENST00000372736 HEPHL1Q6MZM0 1159 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 GGNQ86UU5 652 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 PHOSPHO1Q8TCT1 267 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 RNASE6Q93091 150 aaKnown RBP20.43■□□□□ 0.86
COL9A2-201ENST00000372736 ZBTB8AQ96BR9 441 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 INTS12Q96CB8 462 aaKnown RBP20.43■□□□□ 0.86
COL9A2-201ENST00000372736 NEURL3Q96EH8 262 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 MARK4Q96L34 752 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 C7orf26Q96N11 449 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 OR52B2Q96RD2 323 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 NMUR2Q9GZQ4 415 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 MCCC2Q9HCC0 563 aa20.43■□□□□ 0.86
COL9A2-201ENST00000372736 SLC22A20A6NK97 555 aa20.42■□□□□ 0.86
COL9A2-201ENST00000372736 EEF1E1-BLOC1S5C9J1V9 151 aa20.42■□□□□ 0.86
COL9A2-201ENST00000372736 EEF1E1O43324 174 aaKnown RBP20.42■□□□□ 0.86
COL9A2-201ENST00000372736 TNFRSF21O75509 655 aa20.42■□□□□ 0.86
COL9A2-201ENST00000372736 C1QCP02747 245 aa20.42■□□□□ 0.86
COL9A2-201ENST00000372736 IDO1P14902 403 aa20.42■□□□□ 0.86
COL9A2-201ENST00000372736 UQCRC1P31930 480 aa20.42■□□□□ 0.86
COL9A2-201ENST00000372736 EEFSECP57772 596 aaKnown RBP20.42■□□□□ 0.86
COL9A2-201ENST00000372736 SNTB1Q13884 538 aaKnown RBP20.42■□□□□ 0.86
COL9A2-201ENST00000372736 ARHGAP11BQ3KRB8 267 aa20.42■□□□□ 0.86
COL9A2-201ENST00000372736 TNFAIP8L2Q6P589 184 aaPredicted RBP20.42■□□□□ 0.86
COL9A2-201ENST00000372736 CBLN3Q6UW01 205 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms