RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 TANKQ92844 425 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 TCEAL3Q969E4 200 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 NT5C3BQ969T7 300 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 SLA2Q9H6Q3 261 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 SUSD2Q9UGT4 822 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 RARRES3Q9UL19 164 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF175Q9Y473 711 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 NUBP2Q9Y5Y2 271 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 PTPRZ1P23471 2315 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-203ENST00000372407 MEIOCA2RUB1 952 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 E2F3O00716 465 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 TFP02787 698 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 CA3P07451 260 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 TMEM225BP0DP42 221 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF43P17038 809 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 RAB5BP61020 215 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF91Q05481 1191 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 ELP2Q6IA86 826 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 DUS1LQ6P1R4 473 aaKnown RBP10.76□□□□□ -0.69
PTPRF-203ENST00000372407 LSMEM2Q8N112 164 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 ARL14Q8N4G2 192 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 SPRYD4Q8WW59 207 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-203ENST00000372407 BPIFA2Q96DR5 249 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 SLC39A13Q96H72 371 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 THAP7Q9BT49 309 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-203ENST00000372407 C1QTNF2Q9BXJ5 285 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 CWH43Q9H720 699 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 NT5DC2Q9H857 520 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 DDX31Q9H8H2 851 aaKnown RBP10.76□□□□□ -0.69
PTPRF-203ENST00000372407 OR6C2Q9NZP2 312 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 USP36Q9P275 1121 aaKnown RBP10.76□□□□□ -0.69
PTPRF-203ENST00000372407 ICKQ9UPZ9 632 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 CACNG2Q9Y698 323 aa10.76□□□□□ -0.69
PTPRF-203ENST00000372407 F5P12259 2224 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 A0A1W2PQ09 198 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 SYT7O43581 403 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 IL1AP01583 271 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 FOSL2P15408 326 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 HBA1P69905 142 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 DLX2Q07687 328 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-203ENST00000372407 MLLT11Q13015 90 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-203ENST00000372407 CFAP77Q6ZQR2 320 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 PXKQ7Z7A4 578 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 SLC35F2Q8IXU6 374 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 SLC39A11Q8N1S5 342 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 GPR137CQ8N3F9 429 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 ADAMTS14Q8WXS8 1223 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF583Q96ND8 569 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 SMIM14Q96QK8 99 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 PBDC1Q9BVG4 233 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 OR51J1Q9H342 316 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 BABAM2Q9NXR7 383 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 CACNA1CQ13936 2221 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 CIB4A0PJX0 185 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 DCDC2BA2VCK2 349 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 FAM171A2A8MVW0 826 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 MAN2B1O00754 1011 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 CTDSP2O14595 271 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 EGFP01133 1207 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 ARAFP10398 606 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 HIST1H1TP22492 207 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-203ENST00000372407 RABIFP47224 123 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 SGSHP51688 502 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 C6orf132Q5T0Z8 1188 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 KIAA1211LQ6NV74 962 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 KLHDC9Q8NEP7 349 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 OR52D1Q9H346 318 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 UNKLQ9H9P5 680 aaKnown RBP10.75□□□□□ -0.69
PTPRF-203ENST00000372407 ACSS1Q9NUB1 689 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-203ENST00000372407 PRSS21Q9Y6M0 314 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 OR8U9P0C7N5 309 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 TUBG1P23258 451 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 SSTR4P31391 388 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 POLR2IP36954 125 aaKnown RBP10.75□□□□□ -0.69
PTPRF-203ENST00000372407 NR4A2P43354 598 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 SLC6A8P48029 635 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 MGAT3Q09327 533 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 SMN1Q16637 294 aaKnown RBP10.75□□□□□ -0.69
PTPRF-203ENST00000372407 PODNL1Q6PEZ8 512 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 B3GNT8Q7Z7M8 397 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 LILRA2Q8N149 483 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 SLC7A13Q8TCU3 470 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 ADAMTS16Q8TE57 1224 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 S100PBPQ96BU1 408 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 PHB2Q99623 299 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 C7orf50Q9BRJ6 194 aaKnown RBP10.75□□□□□ -0.69
PTPRF-203ENST00000372407 SORBS1Q9BX66 1292 aaKnown RBP10.75□□□□□ -0.69
PTPRF-203ENST00000372407 KCNS2Q9ULS6 477 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 PIAS3Q9Y6X2 628 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 COL24A1Q17RW2 1714 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 A6NLC8 198 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 UBL4AP11441 157 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 HOXB9P17482 250 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-203ENST00000372407 TACR1P25103 407 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 S100PP25815 95 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 TLE3Q04726 772 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 MALLQ13021 153 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 TMEM150AQ86TG1 271 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 LRRC56Q8IYG6 542 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-203ENST00000372407 GGHQ92820 318 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms