RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 FAM72BQ86X60 149 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 OR5M8Q8NGP6 311 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 CNIH3Q8TBE1 160 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 SLC39A13Q96H72 371 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 ADRB3P13945 408 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 ETV6P41212 452 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 CASP6P55212 293 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 PCLAFQ15004 111 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 MSS51Q4VC12 460 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 ALKAL2Q6UX46 152 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 ZNF695Q8IW36 515 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 RELTQ969Z4 430 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 METTL7AQ9H8H3 244 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 B3GAT2Q9NPZ5 323 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 NLGN3Q9NZ94 848 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 OR6C2Q9NZP2 312 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 ARL2-SNX15V9GYD0 113 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 FAM189A1O60320 539 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 TRAPPC2P0DI81 140 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 TRAPPC2BP0DI82 140 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 RIN1Q13671 783 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 ARSJQ5FYB0 599 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 ZNF546Q86UE3 836 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 ZSWIM9Q86XI8 627 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 HS3ST5Q8IZT8 346 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 UMODL1-AS1Q8N2C9 162 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 OR1M1Q8NGA1 313 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 FNDC9Q8TBE3 224 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 ST8SIA4Q92187 359 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 FKBP10Q96AY3 582 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 SMIM12Q96EX1 92 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 SLC22A11Q9NSA0 550 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 SPHK1Q9NYA1 384 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 TP53TG5Q9Y2B4 290 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 DDCP20711 480 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 FAM26DQ5JW98 314 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 CHFRQ96EP1 664 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 PDCD1LG2Q9BQ51 273 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 ZNF251Q9BRH9 671 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 VPS29Q9UBQ0 182 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 HSPE1-MOB4S4R3N1 261 aa13.29□□□□□ -0.28
RAPGEF1-202ENST00000372190 A0A1W2PQL4 384 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 LINC01553A4QN01 128 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 SIX3O95343 332 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 CLEC3BP05452 202 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 CKMT1AP12532 417 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 RPL7P18124 248 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 HNRNPA2B1P22626 353 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 IMPA1P29218 277 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 SPHARQ15513 63 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 TAF9Q16594 264 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 SPIN4Q56A73 249 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 PDZD11Q5EBL8 140 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 PLEKHS1Q5SXH7 462 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 CST9LP1Q5W188 147 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 COMMD1Q8N668 190 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 C15orf54Q8N8G6 183 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 OR56A3Q8NH54 315 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 MMABQ96EY8 250 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 SDSLQ96GA7 329 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 CLSTN3Q9BQT9 956 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 NUDT16L1Q9BRJ7 211 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 SLC35A5Q9BS91 424 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 SUCNR1Q9BXA5 334 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 BRF2Q9HAW0 419 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 FANCGO15287 622 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 NSA2O95478 260 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 KLK1P06870 262 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 F7P08709 466 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 ADAM5Q6NVV9 412 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 OR56B4Q8NH76 319 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 GPN2Q9H9Y4 310 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 MRM3Q9HC36 420 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 DCAF16Q9NXF7 216 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 NRAPQ86VF7 1730 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 CREG1O75629 220 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 CNOT4O95628 575 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 FBLP22087 321 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 NFYBP25208 207 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 RPS15P62841 145 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 DUOXA1Q1HG43 343 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 PCGF3Q3KNV8 242 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 C10orf62Q5T681 223 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 OR5M3Q8NGP4 307 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 HSH2DQ96JZ2 352 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 B3GNT2Q9NY97 397 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 HCSTQ9UBK5 93 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 B3GALT1Q9Y5Z6 326 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 TMEM265A0A087WTH1 108 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 A0A1B0GVG6 124 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 CD8B2A6NJW9 211 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 K7ERQ8 282 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 CD8BP10966 210 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 USP53Q70EK8 1073 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 GRHL3Q8TE85 626 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 RNF141Q8WVD5 230 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 TMEM18Q96B42 140 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 NUMBLQ9Y6R0 609 aa13.28□□□□□ -0.28
RAPGEF1-202ENST00000372190 H3BSH0 61 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 ARPC1BO15143 372 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms