RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 TMPRSS11DO60235 418 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 DNAJA2O60884 412 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 SMPD2O60906 423 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 LRATO95237 230 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 HPNP05981 417 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 LAMP1P11279 417 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 DDCP20711 480 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 GCKP35557 465 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 FRKP42685 505 aaPredicted RBP13.73□□□□□ -0.21
RPF1-202ENST00000370656 TMED10P49755 219 aaKnown RBP13.73□□□□□ -0.21
RPF1-202ENST00000370656 CDK9P50750 372 aaKnown RBP13.73□□□□□ -0.21
RPF1-202ENST00000370656 AGFG1P52594 562 aaKnown RBP13.73□□□□□ -0.21
RPF1-202ENST00000370656 MAPK12P53778 367 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 RPP38P78345 283 aaKnown RBP13.73□□□□□ -0.21
RPF1-202ENST00000370656 C2orf80Q0P641 193 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 NHSL2Q5HYW2 709 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 Q5PR19 223 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 OR4F3Q6IEY1 312 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 OR4N5Q8IXE1 308 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 MSRB3Q8IXL7 192 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 ST13P4Q8IZP2 240 aaPredicted RBP13.73□□□□□ -0.21
RPF1-202ENST00000370656 LRRC75A-AS1Q8N1F1 130 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 SIMC1Q8NDZ2 872 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 WDR60Q8WVS4 1066 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 PIGTQ969N2 578 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 PPWD1Q96BP3 646 aaKnown RBP13.73□□□□□ -0.21
RPF1-202ENST00000370656 COX4I2Q96KJ9 171 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 ANKRD27Q96NW4 1050 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 BDH2Q9BUT1 245 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 DUSP26Q9BV47 211 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 RBM24Q9BX46 236 aaKnown RBP13.73□□□□□ -0.21
RPF1-202ENST00000370656 SORBS1Q9BX66 1292 aaKnown RBP13.73□□□□□ -0.21
RPF1-202ENST00000370656 WWTR1Q9GZV5 400 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 ATAD3AQ9NVI7 634 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 NDRG3Q9UGV2 375 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 PHF11Q9UIL8 331 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 ATRQ13535 2644 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 SH3D21A4FU49 640 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 PRORSD1PA6NEY8 169 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 HRKO00198 91 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 OR10H2O60403 315 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 CIB2O75838 187 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 BCAS2O75934 225 aaPredicted RBP13.72□□□□□ -0.21
RPF1-202ENST00000370656 IL3P08700 152 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 NUDT7P0C024 238 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 TMIGD3P0DMS9 266 aaPredicted RBP13.72□□□□□ -0.21
RPF1-202ENST00000370656 DDX5P17844 614 aaKnown RBP13.72□□□□□ -0.21
RPF1-202ENST00000370656 PCSK6P29122 969 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 SLC7A2P52569 658 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 PPP2R2BQ00005 443 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 SLAMF1Q13291 335 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 TRIM25Q14258 630 aaKnown RBP13.72□□□□□ -0.21
RPF1-202ENST00000370656 ZNF267Q14586 743 aaPredicted RBP13.72□□□□□ -0.21
RPF1-202ENST00000370656 HEPACAMQ14CZ8 416 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 ZNF385BQ569K4 471 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 CXorf67Q86X51 503 aaPredicted RBP13.72□□□□□ -0.21
RPF1-202ENST00000370656 VPS37AQ8NEZ2 397 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 SPATA3Q8NHX4 192 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 ABTB1Q969K4 478 aaPredicted RBP13.72□□□□□ -0.21
RPF1-202ENST00000370656 NTNG2Q96CW9 530 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 ZFP3Q96NJ6 502 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 SECISBP2Q96T21 854 aaKnown RBP13.72□□□□□ -0.21
RPF1-202ENST00000370656 PIP5K1AQ99755 562 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 SH3GL1Q99961 368 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 SLC39A3Q9BRY0 314 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 LYARQ9NX58 379 aaKnown RBP13.72□□□□□ -0.21
RPF1-202ENST00000370656 SLC25A37Q9NYZ2 338 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 VAPAQ9P0L0 249 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 ERVK-19Q9WJR5 959 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 SLC6A5Q9Y345 797 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 PCDHB14Q9Y5E9 798 aa13.72□□□□□ -0.21
RPF1-202ENST00000370656 EXPH5Q8NEV8 1989 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 C2orf92A0A1B0GVN3 265 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 H7C1Q1 480 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 GUCY1B2O75343 617 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 PDE5AO76074 875 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 GBAP04062 536 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 FAM58BPP0C7Q3 252 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 CYP4B1P13584 511 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 BMP7P18075 431 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 BUD31P41223 144 aaPredicted RBP13.71□□□□□ -0.21
RPF1-202ENST00000370656 NRG3P56975 720 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 SLC37A1P57057 533 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 MS4A2Q01362 244 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 KPNB1Q14974 876 aaKnown RBP13.71□□□□□ -0.21
RPF1-202ENST00000370656 MLC1Q15049 377 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 EBPQ15125 230 aaKnown RBP13.71□□□□□ -0.21
RPF1-202ENST00000370656 PRSS53Q2L4Q9 553 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 PGS1Q32NB8 556 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 C6orf163Q5TEZ5 329 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 HLA-DQA1Q5Y7H0 255 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 ZPLD1Q8TCW7 415 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 RIT1Q92963 219 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 GFM2Q969S9 779 aaKnown RBP13.71□□□□□ -0.21
RPF1-202ENST00000370656 ASB9Q96DX5 294 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 WDYHV1Q96HA8 205 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 GNRHR2Q96P88 292 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 TM9SF2Q99805 663 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 SFXN3Q9BWM7 321 aa13.71□□□□□ -0.21
RPF1-202ENST00000370656 UGT2B28Q9BY64 529 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms