RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 MR1Q95460 341 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 SPRY4Q9C004 299 aa16.03■□□□□ 0.16
UBE3D-203ENST00000369747 C19orf53Q9UNZ5 99 aaPredicted RBP16.03■□□□□ 0.16
UBE3D-203ENST00000369747 GPR55Q9Y2T6 319 aaPredicted RBP16.03■□□□□ 0.16
UBE3D-203ENST00000369747 IGLV3-12A0A075B6K2 115 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 SLITRK5O94991 958 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 TP53P04637 393 aaPredicted RBP16.02■□□□□ 0.16
UBE3D-203ENST00000369747 ZGLP1P0C6A0 271 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 ACP2P11117 423 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 ZNF182P17025 639 aaPredicted RBP16.02■□□□□ 0.16
UBE3D-203ENST00000369747 POU1F1P28069 291 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 HSD17B7P56937 341 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 AQP6Q13520 282 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 CTF1Q16619 201 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 DUSP5Q16690 384 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 EXOSC6Q5RKV6 272 aaKnown RBP16.02■□□□□ 0.16
UBE3D-203ENST00000369747 MORN4Q8NDC4 146 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 DOK4Q8TEW6 326 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 YIPF6Q96EC8 236 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 PTCHD1Q96NR3 888 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 NECTIN3Q9NQS3 549 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 SELENONQ9NZV5 590 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 MKL2Q9ULH7 1088 aa16.02■□□□□ 0.16
UBE3D-203ENST00000369747 NUP210LQ5VU65 1888 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 FRYQ5TBA9 3013 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 FRS3O43559 492 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 SOX14O95416 240 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 AGR2O95994 175 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 NR4A1P22736 598 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 C21orf33P30042 268 aaPredicted RBP16.02■□□□□ 0.15
UBE3D-203ENST00000369747 STT3AP46977 705 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 OCA2Q04671 838 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 STX4Q12846 297 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 ARHGAP11BQ3KRB8 267 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 MED25Q71SY5 747 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 TSLPQ969D9 159 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 SLC46A1Q96NT5 459 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 PRR14Q9BWN1 585 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 ALOXE3Q9BYJ1 711 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 TGIF2Q9GZN2 237 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 VN1R1Q9GZP7 353 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 CTPS2Q9NRF8 586 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 MKLN1Q9UL63 735 aa16.02■□□□□ 0.15
UBE3D-203ENST00000369747 LAMA5O15230 3695 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 BCAS1O75363 584 aaPredicted RBP16.01■□□□□ 0.15
UBE3D-203ENST00000369747 DLGAP3O95886 979 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 LCKP06239 509 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 CDK1P06493 297 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 PSMB9P28065 219 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 PRKAR1BP31321 381 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 LSM11P83369 360 aaKnown RBP eCLIP16.01■□□□□ 0.15
UBE3D-203ENST00000369747 HPCAP84074 193 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 RHAGQ02094 409 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 SPCS2Q15005 226 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 UBE2UQ5VVX9 321 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 TYW3Q6IPR3 259 aaKnown RBP16.01■□□□□ 0.15
UBE3D-203ENST00000369747 MRPL14Q6P1L8 145 aaKnown RBP16.01■□□□□ 0.15
UBE3D-203ENST00000369747 DGAT2L6Q6ZPD8 337 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 OR4K5Q8NGD3 323 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 OR52P1PQ8NH57 321 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 MYDGFQ969H8 173 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 MESP1Q9BRJ9 268 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 POLR2J3Q9H1A7 115 aaKnown RBP16.01■□□□□ 0.15
UBE3D-203ENST00000369747 GPR83Q9NYM4 423 aa16.01■□□□□ 0.15
UBE3D-203ENST00000369747 A0A087WV62 115 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 BLACEA4D250 179 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 MPZL2O60487 215 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 PLOD3O60568 738 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 GABARAPO95166 117 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 MMP11P24347 488 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 MGAT2Q10469 447 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 PRICKLE4Q2TBC4 344 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 SLX4IPQ5VYV7 408 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 FAM198BQ6UWH4 519 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 C6orf15Q6UXA7 325 aaPredicted RBP16■□□□□ 0.15
UBE3D-203ENST00000369747 CD300LDQ6UXZ3 194 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 QSOX2Q6ZRP7 698 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 PTCHD4Q6ZW05 846 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 ZER1Q7Z7L7 766 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 CLIP4Q8N3C7 705 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 SPSB2Q99619 263 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 ADAP2Q9NPF8 381 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 PADI1Q9ULC6 663 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 VSTM2BA6NLU5 285 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 NT5EP21589 574 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 ST13P50502 369 aaKnown RBP16■□□□□ 0.15
UBE3D-203ENST00000369747 IGLV3-21P80748 117 aaPredicted RBP16■□□□□ 0.15
UBE3D-203ENST00000369747 TBCEQ15813 527 aaPredicted RBP16■□□□□ 0.15
UBE3D-203ENST00000369747 C12orf73Q69YU5 71 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 LINC00471Q8N535 108 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 ZNF675Q8TD23 568 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 DIO2Q92813 273 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 SDF2Q99470 211 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 GPA33Q99795 319 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 SLC26A1Q9H2B4 701 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 PIGUQ9H490 435 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 MTHFD2LQ9H903 347 aaPredicted RBP16■□□□□ 0.15
UBE3D-203ENST00000369747 MAT2BQ9NZL9 334 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 SLC13A4Q9UKG4 626 aa16■□□□□ 0.15
UBE3D-203ENST00000369747 ZNF443Q9Y2A4 671 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms