RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 TRAPPC2BP0DI82 140 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 PTGER1P34995 402 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 COL9A2Q14055 689 aaPredicted RBP14.98□□□□□ -0.01
COL17A1-202ENST00000369733 DHRS4L2Q6PKH6 230 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 OR7G2Q8NG99 324 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 KCTD12Q96CX2 325 aaKnown RBP14.98□□□□□ -0.01
COL17A1-202ENST00000369733 OSGIN1Q9UJX0 560 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 BACE2Q9Y5Z0 518 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 TCRBV5S2A0A599 114 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 IGLON5A6NGN9 336 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 TSPAN15O95858 294 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 SYPP08247 313 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 ZNF865P0CJ78 1059 aaPredicted RBP14.98□□□□□ -0.01
COL17A1-202ENST00000369733 MAOAP21397 527 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 SLC1A3P43003 542 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 ZNF41P51814 821 aaPredicted RBP14.98□□□□□ -0.01
COL17A1-202ENST00000369733 ENTPD8Q5MY95 495 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 HBMQ6B0K9 141 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 HSD11B1LQ7Z5J1 315 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 ZNF440Q8IYI8 595 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 ZNF619Q8N2I2 560 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 OR4K17Q8NGC6 315 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 DYNC2LI1Q8TCX1 351 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 CREB3L4Q8TEY5 395 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 NDRG2Q9UN36 371 aaKnown RBP14.98□□□□□ -0.01
COL17A1-202ENST00000369733 MYADML2A6NDP7 307 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 DNAJB6O75190 326 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 GNRHRP30968 328 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 CAPZA1P52907 286 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 ILKQ13418 452 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 UBE2NLQ5JXB2 153 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 ARHGAP40Q5TG30 622 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 SBSNQ6UWP8 590 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 LRRC56Q8IYG6 542 aaPredicted RBP14.98□□□□□ -0.01
COL17A1-202ENST00000369733 NUDT8Q8WV74 236 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 CXCL16Q9H2A7 254 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 SLC6A5Q9Y345 797 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 KDM4FA0A1W2PPD8 638 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 UNCXA6NJT0 531 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 PTPRRQ15256 657 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 B3GLCTQ6Y288 498 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 GPR148Q8TDV2 347 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 A0A0A6YYH2 397 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 A6NJ64 397 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 ZNF736B4DX44 427 aaPredicted RBP14.97□□□□□ -0.01
COL17A1-202ENST00000369733 SOX9P48436 509 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 PSPHP78330 225 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 GPAT4Q86UL3 456 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 OR1J4Q8NGS1 313 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 SCGB1C1Q8TD33 95 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 BPIFA2Q96DR5 249 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 FYTTD1Q96QD9 318 aaKnown RBP14.97□□□□□ -0.01
COL17A1-202ENST00000369733 TREX2Q9BQ50 279 aaPredicted RBP14.97□□□□□ -0.01
COL17A1-202ENST00000369733 C11orf84Q9BUA3 381 aaPredicted RBP14.97□□□□□ -0.01
COL17A1-202ENST00000369733 NTN4Q9HB63 628 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 POLMQ9NP87 494 aaPredicted RBP14.97□□□□□ -0.01
COL17A1-202ENST00000369733 LTB4R2Q9NPC1 389 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 KRBOX1C9JBD0 128 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 FAM227AF5H4B4 570 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 GFRA2O00451 464 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 PROS1P07225 676 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 UBBP0CG47 229 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 UBCP0CG48 685 aaKnown RBP14.97□□□□□ -0.01
COL17A1-202ENST00000369733 JUNDP17535 347 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 PKLRP30613 574 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 RPS27AP62979 156 aaKnown RBP14.97□□□□□ -0.01
COL17A1-202ENST00000369733 UBA52P62987 128 aaKnown RBP14.97□□□□□ -0.01
COL17A1-202ENST00000369733 P2RY14Q15391 338 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 C1orf94Q6P1W5 598 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 VRK2Q86Y07 508 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 OR5H2Q8NGV7 314 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 SLC39A13Q96H72 371 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 SLC2A11Q9BYW1 496 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 RPS10P5Q9NQ39 176 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 CLEC2DQ9UHP7 191 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 NAALAD2Q9Y3Q0 740 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 CITO14578 2027 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 PLGP00747 810 aaPredicted RBP14.97□□□□□ -0.01
COL17A1-202ENST00000369733 TPT1P13693 172 aaKnown RBP14.97□□□□□ -0.01
COL17A1-202ENST00000369733 ELAVL3Q14576 367 aaKnown RBP14.97□□□□□ -0.01
COL17A1-202ENST00000369733 ZNF529Q6P280 563 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 C12orf45Q8N5I9 185 aaPredicted RBP14.97□□□□□ -0.01
COL17A1-202ENST00000369733 EMC7Q9NPA0 242 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 AKIP1Q9NQ31 210 aa14.97□□□□□ -0.01
COL17A1-202ENST00000369733 TMEM221A6NGB7 291 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 S100PP25815 95 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 RPS21P63220 83 aaKnown RBP14.96□□□□□ -0.01
COL17A1-202ENST00000369733 CDC20Q12834 499 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 TSPAN31Q12999 210 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 DDX60Q8IY21 1712 aaKnown RBP14.96□□□□□ -0.01
COL17A1-202ENST00000369733 PAQR8Q8TEZ7 354 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 TMEM234Q8WY98 164 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 CDC6Q99741 560 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 PSD2Q9BQI7 771 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 METTL7AQ9H8H3 244 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 CXXC1Q9P0U4 656 aaPredicted RBP14.96□□□□□ -0.01
COL17A1-202ENST00000369733 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 TVP23AA6NH52 213 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 AGPAT2O15120 278 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 SCO2O43819 266 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms