RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 CKLFQ9UBR5 152 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 AGO1Q9UL18 857 aaKnown RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 PIAS3Q9Y6X2 628 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 ZNF142P52746 1687 aaPredicted RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 PDE4DIPQ5VU43 2346 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 K7ERU9 68 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 ARNTLO00327 626 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 STBD1O95210 358 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 HIST1H2ABP04908 130 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 SMIM10L2AP0DMW4 78 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 SMIM10L2BP0DMW5 78 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 TAGLN2P37802 199 aaKnown RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 H3F3AP84243 136 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 PTPRCAPQ14761 206 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 UBXN2BQ14CS0 331 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 SLC5A12Q1EHB4 618 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 RFTN2Q52LD8 501 aaPredicted RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 KDM4DQ6B0I6 523 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 OR5M10Q6IEU7 315 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 HIST3H2AQ7L7L0 130 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 ZNF627Q7L945 461 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 LDB1Q86U70 411 aaPredicted RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 UNC93AQ86WB7 457 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 OR5M3Q8NGP4 307 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 POC1BQ8TC44 478 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 HMGB4Q8WW32 186 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 SMARCD2Q92925 531 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 HIST1H2ACQ93077 130 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 WNT8BQ93098 351 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 C12orf42Q96LP6 360 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 SLC2A9Q9NRM0 540 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 M0R129 80 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 TREHO43280 583 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 SH3BGRLO75368 114 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 RPP14O95059 124 aaKnown RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 BDKRB2P30411 391 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 MTNR1AP48039 350 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 CASP9P55211 416 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 RBMS2Q15434 407 aaKnown RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 OR4F3Q6IEY1 312 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 RGS7BPQ6MZT1 257 aaPredicted RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 OR4M1Q8NGD0 313 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 ESAMQ96AP7 390 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 SYT17Q9BSW7 474 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 PARPBPQ9NWS1 579 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 USP36Q9P275 1121 aaKnown RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 A0A1B0GUH1 482 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 A0A1B0GV50 99 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 NCR1O76036 304 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 DIRAS3O95661 229 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 C4BPAP04003 597 aaKnown RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 IGFBP1P08833 259 aaPredicted RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 ARL2P36404 184 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 SNCAP37840 140 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 AKR1C3P42330 323 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 BDKRB1P46663 353 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 RPL23AP62750 156 aaKnown RBP9.83□□□□□ -0.84
PRDM1-201ENST00000369089 EFEMP1Q12805 493 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 DUSP4Q13115 394 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 SLC10A1Q14973 349 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 PCGF3Q3KNV8 242 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 NDUFAF7Q7L592 441 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 DCXRQ7Z4W1 244 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 LRRTM1Q86UE6 522 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 OR6K3Q8NGY3 331 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 FAM110BQ8TC76 370 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 PPCDCQ96CD2 204 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 MRI1Q9BV20 369 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 BCAS3Q9H6U6 928 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 THSD1Q9NS62 852 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 LRP6O75581 1613 aa9.83□□□□□ -0.84
PRDM1-201ENST00000369089 A0A0B4J2A0 478 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 PRSS47A8MTI9 375 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 MCRIP1C9JLW8 97 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 CLDN9O95484 217 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 CYB5AP00167 134 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 CSF1P09603 554 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 GABRA1P14867 456 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 BMI1P35226 326 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 GRM5P41594 1212 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 SRP9P49458 86 aaKnown RBP9.82□□□□□ -0.84
PRDM1-201ENST00000369089 ZNF84P51523 738 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 RAG2P55895 527 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 ZNF630Q2M218 657 aaPredicted RBP9.82□□□□□ -0.84
PRDM1-201ENST00000369089 DUSP28Q4G0W2 176 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 SPNS3Q6ZMD2 512 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 NUDT13Q86X67 352 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 GPR135Q8IZ08 494 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 DUSP19Q8WTR2 217 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 LINC01599Q8WXQ3 324 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 RNF31Q96EP0 1072 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 ZNF599Q96NL3 588 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 CDCA4Q9BXL8 241 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 WWTR1Q9GZV5 400 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 ABRACLQ9P1F3 81 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 SHPKQ9UHJ6 478 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 GPR45Q9Y5Y3 372 aa9.82□□□□□ -0.84
PRDM1-201ENST00000369089 DUOX1Q9NRD9 1551 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms