RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CDC40O60508 579 aaKnown RBP eCLIP12.67□□□□□ -0.38
TPM3-211ENST00000368531 C1QL1O75973 258 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 PDE9AO76083 593 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 CSTAP01040 98 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 DBIP07108 87 aaKnown RBP12.67□□□□□ -0.38
TPM3-211ENST00000368531 GUSBP08236 651 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 TCN1P20061 433 aaPredicted RBP12.67□□□□□ -0.38
TPM3-211ENST00000368531 MST1P26927 711 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 PCGF2P35227 344 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 MAGEA5P43359 124 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 GSK3BP49841 420 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 EEFSECP57772 596 aaKnown RBP12.67□□□□□ -0.38
TPM3-211ENST00000368531 RBBP4Q09028 425 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 C6orf89Q6UWU4 347 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 KRT73Q86Y46 540 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 PLCZ1Q86YW0 608 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 MICU2Q8IYU8 434 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 TMCO5AQ8N6Q1 288 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 METTL25Q8N6Q8 603 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 FAM156AQ8NDB6 213 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 CPT1CQ8TCG5 803 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 WDR60Q8WVS4 1066 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 NTNG2Q96CW9 530 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 REXO5Q96IC2 774 aaKnown RBP12.67□□□□□ -0.38
TPM3-211ENST00000368531 KCTD14Q9BQ13 255 aaPredicted RBP12.67□□□□□ -0.38
TPM3-211ENST00000368531 SPATA9Q9BWV2 254 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 ALG2Q9H553 416 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 BCL2L10Q9HD36 194 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 OLAHQ9NV23 265 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 NDE1Q9NXR1 346 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 TMEM181Q9P2C4 612 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 B4GALT7Q9UBV7 327 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 ZNF232Q9UNY5 417 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 AP3M1Q9Y2T2 418 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 ATMQ13315 3056 aa12.67□□□□□ -0.38
TPM3-211ENST00000368531 DSPPQ9NZW4 1301 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 ELOVL7A1L3X0 281 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 B4DXG7 233 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 B8ZZF3 427 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 M0QX08 132 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 GSTA4O15217 222 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 SUV39H1O43463 412 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 BCAS1O75363 584 aaPredicted RBP12.66□□□□□ -0.38
TPM3-211ENST00000368531 GLSO94925 669 aaPredicted RBP12.66□□□□□ -0.38
TPM3-211ENST00000368531 NUDT14O95848 222 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 OPN1SWP03999 348 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 CELA3AP09093 270 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 UBTFL6P0CB48 400 aaPredicted RBP12.66□□□□□ -0.38
TPM3-211ENST00000368531 UBL4AP11441 157 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 RPS4Y1P22090 263 aaKnown RBP12.66□□□□□ -0.38
TPM3-211ENST00000368531 ELAVL4P26378 380 aaKnown RBP12.66□□□□□ -0.38
TPM3-211ENST00000368531 MSX2P35548 267 aaPredicted RBP12.66□□□□□ -0.38
TPM3-211ENST00000368531 CPOXP36551 454 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 CCR4P51679 360 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 KCNJ10P78508 379 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 ZNF117Q03924 483 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 BNIP1Q12981 228 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 FGFBP1Q14512 234 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 SLC10A1Q14973 349 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 LARS2Q15031 903 aaKnown RBP12.66□□□□□ -0.38
TPM3-211ENST00000368531 ZNF311Q5JNZ3 666 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 PRAMEF8Q5VWM4 474 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 PRAMEF7Q5VXH5 474 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 ERICH5Q6P6B1 374 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 CBLN3Q6UW01 205 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 ZNF836Q6ZNA1 936 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 SLC30A8Q8IWU4 369 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 OR2M3Q8NG83 312 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 B4GALNT2Q8NHY0 566 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 FAR1Q8WVX9 515 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 CNOT9Q92600 299 aaKnown RBP12.66□□□□□ -0.38
TPM3-211ENST00000368531 ZNF607Q96SK3 696 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 KLHDC3Q9BQ90 382 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 EXO5Q9H790 373 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 AGPAT4Q9NRZ5 378 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 RLIMQ9NVW2 624 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 TAS2R1Q9NYW7 299 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.66□□□□□ -0.38
TPM3-211ENST00000368531 ABCD2Q9UBJ2 740 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 SUCOQ9UBS9 1254 aaKnown RBP12.66□□□□□ -0.38
TPM3-211ENST00000368531 DKKL1Q9UK85 242 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 ZNF443Q9Y2A4 671 aaPredicted RBP12.66□□□□□ -0.38
TPM3-211ENST00000368531 C15orf41Q9Y2V0 281 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 KMT2BQ9UMN6 2715 aaPredicted RBP12.66□□□□□ -0.38
TPM3-211ENST00000368531 HEATR5AQ86XA9 2040 aa12.66□□□□□ -0.38
TPM3-211ENST00000368531 PIEZO2Q9H5I5 2752 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 PRORSD1PA6NEY8 169 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 ZNHIT1O43257 154 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 ZNF264O43296 627 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 GCM2O75603 506 aaPredicted RBP12.65□□□□□ -0.38
TPM3-211ENST00000368531 CBR3O75828 277 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 PABPC4LP0CB38 370 aaKnown RBP12.65□□□□□ -0.38
TPM3-211ENST00000368531 NID1P14543 1247 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 ETS2P15036 469 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 NCK1P16333 377 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 WIPI1Q5MNZ9 446 aaPredicted RBP12.65□□□□□ -0.38
TPM3-211ENST00000368531 MRPL2Q5T653 305 aaKnown RBP12.65□□□□□ -0.38
TPM3-211ENST00000368531 INTS11Q5TA45 600 aaKnown RBP12.65□□□□□ -0.38
TPM3-211ENST00000368531 BNC2Q6ZN30 1099 aaPredicted RBP12.65□□□□□ -0.38
TPM3-211ENST00000368531 EIF3MQ7L2H7 374 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms