RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 OR5H15A6NDH6 313 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 OR2W5A6NFC9 320 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 PRAMEF25A6NGN4 478 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 C19orf84I3L1E1 186 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 OR10H2O60403 315 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 PRAMEF2O60811 474 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 PDE9AO76083 593 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 CLIC3O95833 236 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 CHRM4P08173 479 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 GNAO1P09471 354 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 THRBP10828 461 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 CD247P20963 164 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 AVPR1BP47901 424 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 ANXA11P50995 505 aaKnown RBP9.17□□□□□ -0.94
TPM3-210ENST00000368530 ALDH3A2P51648 485 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 GTF2A1P52655 376 aaPredicted RBP9.17□□□□□ -0.94
TPM3-210ENST00000368530 CHN2P52757 468 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 PMP22Q01453 160 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 IL1RL1Q01638 556 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 MERTKQ12866 999 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 SLC13A2Q13183 592 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 EXOSC7Q15024 291 aaKnown RBP9.17□□□□□ -0.94
TPM3-210ENST00000368530 TESK1Q15569 626 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.17□□□□□ -0.946e-18■□□□□ 10.2
TPM3-210ENST00000368530 TRMT12Q53H54 448 aaKnown RBP9.17□□□□□ -0.94
TPM3-210ENST00000368530 ZNF628Q5EBL2 1059 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 GARNL3Q5VVW2 1013 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 DGAT2L6Q6ZPD8 337 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 GDF7Q7Z4P5 450 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 TSEN54Q7Z6J9 526 aaKnown RBP9.17□□□□□ -0.94
TPM3-210ENST00000368530 HIPK1Q86Z02 1210 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 ARMC8Q8IUR7 673 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 DHRSXQ8N5I4 330 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 VANGL1Q8TAA9 524 aaPredicted RBP9.17□□□□□ -0.94
TPM3-210ENST00000368530 GEMIN6Q8WXD5 167 aaKnown RBP9.17□□□□□ -0.94
TPM3-210ENST00000368530 SLC9A6Q92581 669 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 GIMAP5Q96F15 307 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 FBXL20Q96IG2 436 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 MS4A4EQ96PG1 132 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 ZNF607Q96SK3 696 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 TREX2Q9BQ50 279 aaPredicted RBP9.17□□□□□ -0.94
TPM3-210ENST00000368530 ACTRT3Q9BYD9 372 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.17□□□□□ -0.94
TPM3-210ENST00000368530 REEP1Q9H902 201 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 CHST11Q9NPF2 352 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 ADAP2Q9NPF8 381 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 MKKSQ9NPJ1 570 aaPredicted RBP9.17□□□□□ -0.94
TPM3-210ENST00000368530 C8orf4Q9NR00 106 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 C14orf105Q9NVL8 296 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 THUMPD1Q9NXG2 353 aaKnown RBP9.17□□□□□ -0.94
TPM3-210ENST00000368530 STMN3Q9NZ72 180 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 PKDREJQ9NTG1 2253 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 C2CD3Q4AC94 2353 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 CCDC168Q8NDH2 2452 aa9.17□□□□□ -0.94
TPM3-210ENST00000368530 CPAMD8Q8IZJ3 1885 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 TGFBR3LH3BV60 316 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 J3KTA2 159 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 SLC19A2O60779 497 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 MFN2O95140 757 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 NSA2O95478 260 aaKnown RBP9.16□□□□□ -0.94
TPM3-210ENST00000368530 CRYABP02511 175 aaKnown RBP9.16□□□□□ -0.94
TPM3-210ENST00000368530 ALPLP05186 524 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 HEXBP07686 556 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 CT62P0C5K7 136 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 ACP2P11117 423 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 ICAM2P13598 275 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 RRM2P31350 389 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 DNAJA1P31689 397 aaKnown RBP9.16□□□□□ -0.94
TPM3-210ENST00000368530 SOX18P35713 384 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 CAPGP40121 348 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 CRISP3P54108 245 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 KRTAP10-9P60411 292 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 SKP1P63208 163 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 SPIBQ01892 262 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 BLMHQ13867 455 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 FAM53BQ14153 422 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 C3AR1Q16581 482 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 DUSP7Q16829 419 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 IQCCQ4KMZ1 466 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 ATAD3BQ5T9A4 648 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 MFSD12Q6NUT3 480 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 SHQ1Q6PI26 577 aaKnown RBP9.16□□□□□ -0.94
TPM3-210ENST00000368530 XKRXQ6PP77 449 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 RPTNQ6XPR3 784 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 Q6ZPB1 254 aaPredicted RBP9.16□□□□□ -0.94
TPM3-210ENST00000368530 C16orf62Q7Z3J2 963 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 PIWIL3Q7Z3Z3 882 aaKnown RBP9.16□□□□□ -0.94
TPM3-210ENST00000368530 GALNT5Q7Z7M9 940 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 CARM1Q86X55 608 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 OFCC1Q8IZS5 231 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 LGI4Q8N135 537 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 OR2L13Q8N349 312 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 ACBD4Q8NC06 268 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 GPR32P1Q8NGA4 272 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 OR51Q1Q8NH59 317 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 BBS10Q8TAM1 723 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 MIPOL1Q8TD10 442 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 ADAMTS15Q8TE58 950 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 TFAP2CQ92754 450 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms