RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CXCL13O43927 109 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 PLGP00747 810 aaPredicted RBP14.33□□□□□ -0.12
CKS1B-202ENST00000368436 NEFHP12036 1026 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 PAX1P15863 534 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 CTBP2P56545 445 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 MLC1Q15049 377 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 BEX5Q5H9J7 111 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 KANK2Q63ZY3 851 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 ESPNLQ6ZVH7 1005 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 MISPQ8IVT2 679 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 HOMEZQ8IX15 550 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 GSPT2Q8IYD1 628 aaKnown RBP14.33□□□□□ -0.12
CKS1B-202ENST00000368436 EIF1ADQ8N9N8 165 aaKnown RBP14.33□□□□□ -0.12
CKS1B-202ENST00000368436 GATSQ8NAP1 163 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 OR2V1Q8NHB1 315 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 POC1BQ8TC44 478 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 PERPQ96FX8 193 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 Q96MF0 132 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 RNF145Q96MT1 663 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 TRMOQ9BU70 441 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 GATA5Q9BWX5 397 aaPredicted RBP14.33□□□□□ -0.12
CKS1B-202ENST00000368436 OR10A4Q9H209 315 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 MCTS1Q9ULC4 181 aaKnown RBP14.33□□□□□ -0.12
CKS1B-202ENST00000368436 DNAJC15Q9Y5T4 150 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 FN1P02751 2386 aaKnown RBP14.33□□□□□ -0.12
CKS1B-202ENST00000368436 A0A0J9YW62 118 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.32□□□□□ -0.12
CKS1B-202ENST00000368436 SYNGR4O95473 234 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 HSPA4LO95757 839 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 OPN1LWP04000 364 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 FGF4P08620 206 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 ALOX5P09917 674 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 LINGO3P0C6S8 592 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 LINC00032P0C843 101 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 NID1P14543 1247 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 KRT4P19013 534 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 ASMTP46597 345 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 SERPINB4P48594 390 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 PRIM2P49643 509 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 ZNF41P51814 821 aaPredicted RBP14.32□□□□□ -0.12
CKS1B-202ENST00000368436 RPL38P63173 70 aaKnown RBP14.32□□□□□ -0.12
CKS1B-202ENST00000368436 PCLAFQ15004 111 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 PPP4R4Q6NUP7 873 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 BEND4Q6ZU67 534 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 PLEKHM3Q6ZWE6 761 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 TRABD2AQ86V40 505 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 C10orf107Q8IVU9 208 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 CLHC1Q8NHS4 586 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 B4GALNT2Q8NHY0 566 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 FBXO30Q8TB52 745 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 FAM120BQ96EK7 910 aaKnown RBP14.32□□□□□ -0.12
CKS1B-202ENST00000368436 KLHDC3Q9BQ90 382 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 BTBD2Q9BX70 525 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 FANCFQ9NPI8 374 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 SIRT3Q9NTG7 399 aaPredicted RBP14.32□□□□□ -0.12
CKS1B-202ENST00000368436 GIN1Q9NXP7 522 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 MID2Q9UJV3 735 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 FIS1Q9Y3D6 152 aa14.32□□□□□ -0.12
CKS1B-202ENST00000368436 SCDO00767 359 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 TNFSF11O14788 317 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 TRIM13O60858 407 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 CHEK2O96017 543 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 BCKDHAP12694 445 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 HPGDP15428 266 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 PTH2RP49190 550 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 CD226Q15762 336 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 UGT3A2Q3SY77 523 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 CCNJQ5T5M9 372 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 HBMQ6B0K9 141 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 LRIG3Q6UXM1 1119 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 SZRD1Q7Z422 152 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 R3HCC1LQ7Z5L2 792 aaKnown RBP14.31□□□□□ -0.12
CKS1B-202ENST00000368436 COX18Q8N8Q8 333 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 UBLCP1Q8WVY7 318 aaPredicted RBP14.31□□□□□ -0.12
CKS1B-202ENST00000368436 SH3YL1Q96HL8 342 aaPredicted RBP14.31□□□□□ -0.12
CKS1B-202ENST00000368436 STACQ99469 402 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 TMEM204Q9BSN7 226 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 PIGUQ9H490 435 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 DUSP22Q9NRW4 184 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 ATP6V1HQ9UI12 483 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 GPR52Q9Y2T5 361 aa14.31□□□□□ -0.12
CKS1B-202ENST00000368436 PRR14LQ5THK1 2151 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 ROS1P08922 2347 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 UQCRHLA0A096LP55 91 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 TMCC2O75069 709 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 HMGN2P05204 90 aaKnown RBP14.3□□□□□ -0.12
CKS1B-202ENST00000368436 PSMB1P20618 241 aaKnown RBP14.3□□□□□ -0.12
CKS1B-202ENST00000368436 AGTR1P30556 359 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 EIF1P41567 113 aaKnown RBP14.3□□□□□ -0.12
CKS1B-202ENST00000368436 NR1H2P55055 460 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 POU6F2P78424 691 aaPredicted RBP14.3□□□□□ -0.12
CKS1B-202ENST00000368436 GALNTL6Q49A17 601 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 PDSS1Q5T2R2 415 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 GTF2IRD2BQ6EKJ0 949 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 ZNF704Q6ZNC4 412 aaPredicted RBP14.3□□□□□ -0.12
CKS1B-202ENST00000368436 MTERF4Q7Z6M4 381 aaKnown RBP14.3□□□□□ -0.12
CKS1B-202ENST00000368436 GTF2IRD2Q86UP8 949 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 STK32CQ86UX6 486 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 LILRA2Q8N149 483 aa14.3□□□□□ -0.12
CKS1B-202ENST00000368436 C4orf33Q8N1A6 199 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms