RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 PRAMEF26H0Y7S4 382 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 SLC9A3R1O14745 358 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ARPC3O15145 178 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 DUX1O43812 170 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 LCMT2O60294 686 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 PRAMEF11O60813 436 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 NOS1APO75052 506 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 CNTN5O94779 1100 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 F10P00742 488 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 MT-ND1P03886 318 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ALDOCP09972 364 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 RFPL3SP0C7P2 107 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 OCMP0CE72 109 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 TRIM49P0CI25 452 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 TRIM49CP0CI26 452 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ZNF44P15621 663 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 CBR1P16152 277 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ZNF18P17022 549 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ADRA1AP35348 466 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 MAGEA2P43356 314 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 F2RL1P55085 397 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 NUP107P57740 925 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 IRX4P78413 519 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 PPP2R2BQ00005 443 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 FOXM1Q08050 763 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 C2orf54Q08AI8 447 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 FCHO2Q0JRZ9 810 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 CDH17Q12864 832 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ALKBH1Q13686 389 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 LY6DQ14210 128 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 FLOT2Q14254 428 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 UGCGQ16739 394 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 C18orf21Q32NC0 220 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 USP41Q3LFD5 358 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 PLK5Q496M5 336 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 RUNDC3AQ59EK9 446 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 TEX30Q5JUR7 227 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 C1orf146Q5VVC0 180 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 PRAMEF7Q5VXH5 474 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ATG9BQ674R7 924 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ZSCAN25Q6NSZ9 544 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 TMEM220Q6QAJ8 160 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 CFAP77Q6ZQR2 320 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 LRRC74BQ6ZQY2 392 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ZBTB49Q6ZSB9 765 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 GSTA5Q7RTV2 222 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 SMIM15Q7Z3B0 74 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ABHD12BQ7Z5M8 362 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 SFR1Q86XK3 245 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 TMC8Q8IU68 726 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 SLC38A6Q8IZM9 456 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 C1orf52Q8N6N3 182 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 PQLC3Q8N755 202 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 GATSQ8NAP1 163 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 CCDC197Q8NCU1 140 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 OR4C5Q8NGB2 326 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 OR4D6Q8NGJ1 314 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 OR4C15Q8NGM1 316 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 OR10S1Q8NGN2 331 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 OR52N1Q8NH53 320 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 DNAJB3Q8WWF6 145 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ADAMTS14Q8WXS8 1223 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 SEMA4DQ92854 862 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 CERS2Q96G23 380 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 C9orf72Q96LT7 481 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 DUX5Q96PT3 197 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 TSC22D3Q99576 134 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 OLFM1Q99784 485 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 CTRCQ99895 268 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 PSD2Q9BQI7 771 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 MED10Q9BTT4 135 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ABHD6Q9BV23 337 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 GATA5Q9BWX5 397 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 FTHL17Q9BXU8 183 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 PLA2G2FQ9BZM2 168 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 NMNAT2Q9BZQ4 307 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ROPN1BQ9BZX4 212 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 SIRPDQ9H106 197 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 MMP27Q9H306 513 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 DPEP2Q9H4A9 486 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ZSCAN16Q9H4T2 348 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 LMAN1LQ9HAT1 526 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 LRRC4Q9HBW1 653 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 HHATLQ9HCP6 504 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 INIPQ9NRY2 104 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ZNF701Q9NV72 531 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 TMEM248Q9NWD8 314 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 PAG1Q9NWQ8 432 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 DPP3Q9NY33 737 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 UVRAGQ9P2Y5 699 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 UPB1Q9UBR1 384 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 RNF14Q9UBS8 474 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 HSPB7Q9UBY9 170 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 PISDQ9UG56 409 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 RASD1Q9Y272 281 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 CMAHPQ9Y471 501 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 ZNF175Q9Y473 711 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 IGSF9BQ9UPX0 1349 aa4.67□□□□□ -1.66
ECHDC1-204ENST00000368292 PCNX1Q96RV3 2341 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms