RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 NOTCH2Q04721 2471 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 A0A087WZY1 265 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 H3BML4 177 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 H3BNH8 94 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 UBDO15205 165 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 SLC22A3O75751 556 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 BMP5P22003 454 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 CHI3L1P36222 383 aaPredicted RBP21.62■■□□□ 1.05
PFDN2-201ENST00000368010 ZNF136P52737 540 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 ATP12AP54707 1039 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 EPGNQ6UW88 154 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 ARSKQ6UWY0 536 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 CHMP1BQ7LBR1 199 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 ADGRE4PQ86SQ3 457 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 TRIML2Q8N7C3 387 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 C9orf106Q8NAJ2 232 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 B4GALNT2Q8NHY0 566 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 PHOSPHO1Q8TCT1 267 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 NEURL3Q96EH8 262 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 UCN2Q96RP3 112 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 TM9SF2Q99805 663 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 TREX2Q9BQ50 279 aaPredicted RBP21.62■■□□□ 1.05
PFDN2-201ENST00000368010 ZIM2Q9NZV7 527 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 ZNF337Q9Y3M9 751 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 CENPEQ02224 2701 aa21.62■■□□□ 1.05
PFDN2-201ENST00000368010 HCRTR2O43614 444 aa21.61■■□□□ 1.05
PFDN2-201ENST00000368010 ZNF17P17021 662 aa21.61■■□□□ 1.05
PFDN2-201ENST00000368010 IGFBP2P18065 325 aa21.61■■□□□ 1.05
PFDN2-201ENST00000368010 KHKP50053 298 aa21.61■■□□□ 1.05
PFDN2-201ENST00000368010 ZNF41P51814 821 aaPredicted RBP21.61■■□□□ 1.05
PFDN2-201ENST00000368010 EEFSECP57772 596 aaKnown RBP21.61■■□□□ 1.05
PFDN2-201ENST00000368010 TMEM44Q2T9K0 475 aa21.61■■□□□ 1.05
PFDN2-201ENST00000368010 KLHL26Q53HC5 615 aa21.61■■□□□ 1.05
PFDN2-201ENST00000368010 ATAD3BQ5T9A4 648 aa21.61■■□□□ 1.05
PFDN2-201ENST00000368010 C16orf62Q7Z3J2 963 aa21.61■■□□□ 1.05
PFDN2-201ENST00000368010 ZNF614Q8N883 585 aa21.61■■□□□ 1.05
PFDN2-201ENST00000368010 RELL2Q8NC24 303 aaPredicted RBP21.61■■□□□ 1.05
PFDN2-201ENST00000368010 WNT2BQ93097 391 aa21.61■■□□□ 1.05
PFDN2-201ENST00000368010 ZBTB8AQ96BR9 441 aa21.61■■□□□ 1.05
PFDN2-201ENST00000368010 TRIM8Q9BZR9 551 aa21.61■■□□□ 1.05
PFDN2-201ENST00000368010 SDR39U1Q9NRG7 319 aaPredicted RBP21.61■■□□□ 1.05
PFDN2-201ENST00000368010 CLCF1Q9UBD9 225 aa21.61■■□□□ 1.05
PFDN2-201ENST00000368010 NUP214P35658 2090 aaPredicted RBP21.6■■□□□ 1.05
PFDN2-201ENST00000368010 CCDC154A6NI56 674 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 NPIPB9F8W1W9 429 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 SEC14L5O43304 696 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 STX11O75558 287 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 TGDSO95455 350 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 IL6P05231 212 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 TMIGD3P0DMS9 266 aaPredicted RBP21.6■■□□□ 1.05
PFDN2-201ENST00000368010 OR12D1P0DN82 309 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 CTSSP25774 331 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 CASP9P55211 416 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 ARHGAP11BQ3KRB8 267 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.6■■□□□ 1.05
PFDN2-201ENST00000368010 TNFAIP8L2Q6P589 184 aaPredicted RBP21.6■■□□□ 1.05
PFDN2-201ENST00000368010 GRAMD2AQ8IUY3 354 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 SMPDL3BQ92485 455 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 ZFP3Q96NJ6 502 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 INPP5KQ9BT40 448 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 MED17Q9NVC6 651 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 DTNAQ9Y4J8 743 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 AP4B1Q9Y6B7 739 aa21.6■■□□□ 1.05
PFDN2-201ENST00000368010 C7orf72A4D263 438 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 SHISA8B8ZZ34 492 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 POLR3GO15318 223 aaPredicted RBP21.59■■□□□ 1.05
PFDN2-201ENST00000368010 SASH3O75995 380 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 OPRM1P35372 400 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 ASCL1P50553 236 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 RNF144AP50876 292 aaPredicted RBP21.59■■□□□ 1.05
PFDN2-201ENST00000368010 ZNF117Q03924 483 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 GPR68Q15743 365 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 HEPHL1Q6MZM0 1159 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 POMZP3Q6PJE2 187 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 ZNF621Q6ZSS3 439 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 MIER2Q8N344 545 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 XAGE5Q8WWM1 108 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 RAB8BQ92930 207 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 LRRC46Q96FV0 321 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 NMUR2Q9GZQ4 415 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 ZNF350Q9GZX5 532 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 ACBD3Q9H3P7 528 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 TCF7L2Q9NQB0 619 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 STOML1Q9UBI4 398 aa21.59■■□□□ 1.05
PFDN2-201ENST00000368010 CACNA1DQ01668 2161 aa21.58■■□□□ 1.05
PFDN2-201ENST00000368010 GTPBP1O00178 669 aaKnown RBP21.58■■□□□ 1.05
PFDN2-201ENST00000368010 RCBTB2O95199 551 aa21.58■■□□□ 1.05
PFDN2-201ENST00000368010 IL18BPO95998 194 aa21.58■■□□□ 1.05
PFDN2-201ENST00000368010 CDKN2CP42773 168 aa21.58■■□□□ 1.05
PFDN2-201ENST00000368010 ANXA11P50995 505 aaKnown RBP21.58■■□□□ 1.05
PFDN2-201ENST00000368010 SUMO3P55854 103 aaPredicted RBP21.58■■□□□ 1.05
PFDN2-201ENST00000368010 PLPPR5Q32ZL2 321 aa21.58■■□□□ 1.05
PFDN2-201ENST00000368010 P4HA3Q7Z4N8 544 aa21.58■■□□□ 1.05
PFDN2-201ENST00000368010 DMRTC2Q8IXT2 367 aaPredicted RBP21.58■■□□□ 1.05
PFDN2-201ENST00000368010 ZNF295-AS1Q8N0V1 137 aa21.58■■□□□ 1.05
PFDN2-201ENST00000368010 GTPBP8Q8N3Z3 284 aaPredicted RBP21.58■■□□□ 1.05
PFDN2-201ENST00000368010 CARD8Q9Y2G2 431 aa21.58■■□□□ 1.05
PFDN2-201ENST00000368010 CELSR2Q9HCU4 2923 aa21.58■■□□□ 1.04
PFDN2-201ENST00000368010 PKDREJQ9NTG1 2253 aa21.58■■□□□ 1.04
PFDN2-201ENST00000368010 KIAA1549Q9HCM3 1950 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms